Gene : Pavir.5NG117800 P. virgatum v4.1
Defline:  (1 of 3) K01363 - cathepsin B (CTSB) Genomic Order:  1074
Name:  ? Pavir.5NG117800 Secondary Identifier:  ? PAC:37575089
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.5NG117800 0.5kb upstream 0.5kb upstream 3512 true Chr05N: 13109589-13113100 Panicum virgatum
Pavir.5NG117800 0.5kb upstream 0.5kb upstream 500 false Chr05N: 13109589-13110088 Panicum virgatum
Pavir.5NG117800 0.5kb downstream 0.5kb downstream 3512 true Chr05N: 13110089-13113600 Panicum virgatum
Pavir.5NG117800 0.5kb downstream 0.5kb downstream 500 false Chr05N: 13113101-13113600 Panicum virgatum
Pavir.5NG117800 1.0kb upstream 1.0kb upstream 4012 true Chr05N: 13109089-13113100 Panicum virgatum
Pavir.5NG117800 1.0kb upstream 1.0kb upstream 1000 false Chr05N: 13109089-13110088 Panicum virgatum
Pavir.5NG117800 1.0kb downstream 1.0kb downstream 4012 true Chr05N: 13110089-13114100 Panicum virgatum
Pavir.5NG117800 1.0kb downstream 1.0kb downstream 1000 false Chr05N: 13113101-13114100 Panicum virgatum
Pavir.5NG117800 2.0kb upstream 2.0kb upstream 5012 true Chr05N: 13108089-13113100 Panicum virgatum
Pavir.5NG117800 2.0kb upstream 2.0kb upstream 2000 false Chr05N: 13108089-13110088 Panicum virgatum
Pavir.5NG117800 2.0kb downstream 2.0kb downstream 5012 true Chr05N: 13110089-13115100 Panicum virgatum
Pavir.5NG117800 2.0kb downstream 2.0kb downstream 2000 false Chr05N: 13113101-13115100 Panicum virgatum
Pavir.5NG117800 5.0kb upstream 5.0kb upstream 8012 true Chr05N: 13105089-13113100 Panicum virgatum
Pavir.5NG117800 5.0kb upstream 5.0kb upstream 5000 false Chr05N: 13105089-13110088 Panicum virgatum
Pavir.5NG117800 5.0kb downstream 5.0kb downstream 8012 true Chr05N: 13110089-13118100 Panicum virgatum
Pavir.5NG117800 5.0kb downstream 5.0kb downstream 5000 false Chr05N: 13113101-13118100 Panicum virgatum
Pavir.5NG117800 10.0kb upstream 10.0kb upstream 13012 true Chr05N: 13100089-13113100 Panicum virgatum
Pavir.5NG117800 10.0kb upstream 10.0kb upstream 10000 false Chr05N: 13100089-13110088 Panicum virgatum
Pavir.5NG117800 10.0kb downstream 10.0kb downstream 13012 true Chr05N: 13110089-13123100 Panicum virgatum
Pavir.5NG117800 10.0kb downstream 10.0kb downstream 10000 false Chr05N: 13113101-13123100 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122197653 5267 Panicoideae View MSA
124576607 5269 Grass View MSA
122041719 5273 Angiosperm View MSA
121345003 5274 Embryophyte View MSA
123427014 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain