Gene : Pavir.5NG113200 P. virgatum v4.1
Defline:  (1 of 75) PF01535//PF12854//PF13041 - PPR repeat (PPR) // PPR repeat (PPR_1) // PPR repeat family (PPR_2) Genomic Order:  1029
Name:  ? Pavir.5NG113200 Secondary Identifier:  ? PAC:37572134
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.5NG113200 0.5kb upstream 0.5kb upstream 4571 true Chr05N: 12164072-12168642 Panicum virgatum
Pavir.5NG113200 0.5kb upstream 0.5kb upstream 500 false Chr05N: 12164072-12164571 Panicum virgatum
Pavir.5NG113200 0.5kb downstream 0.5kb downstream 4571 true Chr05N: 12164572-12169142 Panicum virgatum
Pavir.5NG113200 0.5kb downstream 0.5kb downstream 500 false Chr05N: 12168643-12169142 Panicum virgatum
Pavir.5NG113200 1.0kb upstream 1.0kb upstream 5071 true Chr05N: 12163572-12168642 Panicum virgatum
Pavir.5NG113200 1.0kb upstream 1.0kb upstream 1000 false Chr05N: 12163572-12164571 Panicum virgatum
Pavir.5NG113200 1.0kb downstream 1.0kb downstream 5071 true Chr05N: 12164572-12169642 Panicum virgatum
Pavir.5NG113200 1.0kb downstream 1.0kb downstream 1000 false Chr05N: 12168643-12169642 Panicum virgatum
Pavir.5NG113200 2.0kb upstream 2.0kb upstream 6071 true Chr05N: 12162572-12168642 Panicum virgatum
Pavir.5NG113200 2.0kb upstream 2.0kb upstream 2000 false Chr05N: 12162572-12164571 Panicum virgatum
Pavir.5NG113200 2.0kb downstream 2.0kb downstream 6071 true Chr05N: 12164572-12170642 Panicum virgatum
Pavir.5NG113200 2.0kb downstream 2.0kb downstream 2000 false Chr05N: 12168643-12170642 Panicum virgatum
Pavir.5NG113200 5.0kb upstream 5.0kb upstream 9071 true Chr05N: 12159572-12168642 Panicum virgatum
Pavir.5NG113200 5.0kb upstream 5.0kb upstream 5000 false Chr05N: 12159572-12164571 Panicum virgatum
Pavir.5NG113200 5.0kb downstream 5.0kb downstream 9071 true Chr05N: 12164572-12173642 Panicum virgatum
Pavir.5NG113200 5.0kb downstream 5.0kb downstream 5000 false Chr05N: 12168643-12173642 Panicum virgatum
Pavir.5NG113200 10.0kb upstream 10.0kb upstream 14071 true Chr05N: 12154572-12168642 Panicum virgatum
Pavir.5NG113200 10.0kb upstream 10.0kb upstream 10000 false Chr05N: 12154572-12164571 Panicum virgatum
Pavir.5NG113200 10.0kb downstream 10.0kb downstream 14071 true Chr05N: 12164572-12178642 Panicum virgatum
Pavir.5NG113200 10.0kb downstream 10.0kb downstream 10000 false Chr05N: 12168643-12178642 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122180081 5267 Panicoideae View MSA
124587495 5269 Grass View MSA
122041559 5273 Angiosperm View MSA
121309863 5274 Embryophyte View MSA
123347506 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain