Gene : Pavir.5NG107700 P. virgatum v4.1
Defline:  (1 of 3) 2.4.99.12 - Lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase / Lipid IV(A) KDO transferase Genomic Order:  984
Name:  ? Pavir.5NG107700 Secondary Identifier:  ? PAC:37573685
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvirgatum KDOSYN-PWY Panicum virgatum pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.5NG107700 0.5kb upstream 0.5kb upstream 4115 true Chr05N: 11720581-11724695 Panicum virgatum
Pavir.5NG107700 0.5kb upstream 0.5kb upstream 500 false Chr05N: 11724196-11724695 Panicum virgatum
Pavir.5NG107700 0.5kb downstream 0.5kb downstream 4115 true Chr05N: 11720081-11724195 Panicum virgatum
Pavir.5NG107700 0.5kb downstream 0.5kb downstream 500 false Chr05N: 11720081-11720580 Panicum virgatum
Pavir.5NG107700 1.0kb upstream 1.0kb upstream 4615 true Chr05N: 11720581-11725195 Panicum virgatum
Pavir.5NG107700 1.0kb upstream 1.0kb upstream 1000 false Chr05N: 11724196-11725195 Panicum virgatum
Pavir.5NG107700 1.0kb downstream 1.0kb downstream 4615 true Chr05N: 11719581-11724195 Panicum virgatum
Pavir.5NG107700 1.0kb downstream 1.0kb downstream 1000 false Chr05N: 11719581-11720580 Panicum virgatum
Pavir.5NG107700 2.0kb upstream 2.0kb upstream 5615 true Chr05N: 11720581-11726195 Panicum virgatum
Pavir.5NG107700 2.0kb upstream 2.0kb upstream 2000 false Chr05N: 11724196-11726195 Panicum virgatum
Pavir.5NG107700 2.0kb downstream 2.0kb downstream 5615 true Chr05N: 11718581-11724195 Panicum virgatum
Pavir.5NG107700 2.0kb downstream 2.0kb downstream 2000 false Chr05N: 11718581-11720580 Panicum virgatum
Pavir.5NG107700 5.0kb upstream 5.0kb upstream 8615 true Chr05N: 11720581-11729195 Panicum virgatum
Pavir.5NG107700 5.0kb upstream 5.0kb upstream 5000 false Chr05N: 11724196-11729195 Panicum virgatum
Pavir.5NG107700 5.0kb downstream 5.0kb downstream 8615 true Chr05N: 11715581-11724195 Panicum virgatum
Pavir.5NG107700 5.0kb downstream 5.0kb downstream 5000 false Chr05N: 11715581-11720580 Panicum virgatum
Pavir.5NG107700 10.0kb upstream 10.0kb upstream 13615 true Chr05N: 11720581-11734195 Panicum virgatum
Pavir.5NG107700 10.0kb upstream 10.0kb upstream 10000 false Chr05N: 11724196-11734195 Panicum virgatum
Pavir.5NG107700 10.0kb downstream 10.0kb downstream 13615 true Chr05N: 11710581-11724195 Panicum virgatum
Pavir.5NG107700 10.0kb downstream 10.0kb downstream 10000 false Chr05N: 11710581-11720580 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122185332 5267 Panicoideae View MSA
124575901 5269 Grass View MSA
122042607 5273 Angiosperm View MSA
121344444 5274 Embryophyte View MSA
123380045 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain