Gene : Thecc1EG022560 T. cacao v1.1

Defline:  (1 of 2) PTHR11362:SF13 - PROTEIN TERMINAL FLOWER 1 Genomic Order:  843
Name:  ? Thecc1EG022560 Secondary Identifier:  ? PAC:27422930

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG022560 0.5kb upstream 0.5kb upstream 2186 true scaffold_5: 5711264-5713449 Theobroma cacao
Thecc1EG022560 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 5711264-5711763 Theobroma cacao
Thecc1EG022560 0.5kb downstream 0.5kb downstream 2186 true scaffold_5: 5711764-5713949 Theobroma cacao
Thecc1EG022560 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 5713450-5713949 Theobroma cacao
Thecc1EG022560 1.0kb upstream 1.0kb upstream 2686 true scaffold_5: 5710764-5713449 Theobroma cacao
Thecc1EG022560 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 5710764-5711763 Theobroma cacao
Thecc1EG022560 1.0kb downstream 1.0kb downstream 2686 true scaffold_5: 5711764-5714449 Theobroma cacao
Thecc1EG022560 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 5713450-5714449 Theobroma cacao
Thecc1EG022560 2.0kb upstream 2.0kb upstream 3686 true scaffold_5: 5709764-5713449 Theobroma cacao
Thecc1EG022560 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 5709764-5711763 Theobroma cacao
Thecc1EG022560 2.0kb downstream 2.0kb downstream 3686 true scaffold_5: 5711764-5715449 Theobroma cacao
Thecc1EG022560 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 5713450-5715449 Theobroma cacao
Thecc1EG022560 5.0kb upstream 5.0kb upstream 6686 true scaffold_5: 5706764-5713449 Theobroma cacao
Thecc1EG022560 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 5706764-5711763 Theobroma cacao
Thecc1EG022560 5.0kb downstream 5.0kb downstream 6686 true scaffold_5: 5711764-5718449 Theobroma cacao
Thecc1EG022560 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 5713450-5718449 Theobroma cacao
Thecc1EG022560 10.0kb upstream 10.0kb upstream 11686 true scaffold_5: 5701764-5713449 Theobroma cacao
Thecc1EG022560 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 5701764-5711763 Theobroma cacao
Thecc1EG022560 10.0kb downstream 10.0kb downstream 11686 true scaffold_5: 5711764-5723449 Theobroma cacao
Thecc1EG022560 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 5713450-5723449 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123839627 5264 Brassicales-Malvales View MSA
124340613 5266 SBM View MSA
124251138 5268 Malvidae View MSA
124067341 5270 Rosid View MSA
123749423 5271 Pentapetalae View MSA
122795363 5272 Eudicot View MSA
122043822 5273 Angiosperm View MSA
123429087 5275 Viridiplantae View MSA
121348505 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain