Gene : Thecc1EG022555 T. cacao v1.1

Defline:  (1 of 1) K08658 - prenyl protein peptidase (RCE1, FACE2) Genomic Order:  838
Name:  ? Thecc1EG022555 Secondary Identifier:  ? PAC:27421701

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG022555 0.5kb upstream 0.5kb upstream 4175 true scaffold_5: 5654207-5658381 Theobroma cacao
Thecc1EG022555 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 5657882-5658381 Theobroma cacao
Thecc1EG022555 0.5kb downstream 0.5kb downstream 4175 true scaffold_5: 5653707-5657881 Theobroma cacao
Thecc1EG022555 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 5653707-5654206 Theobroma cacao
Thecc1EG022555 1.0kb upstream 1.0kb upstream 4675 true scaffold_5: 5654207-5658881 Theobroma cacao
Thecc1EG022555 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 5657882-5658881 Theobroma cacao
Thecc1EG022555 1.0kb downstream 1.0kb downstream 4675 true scaffold_5: 5653207-5657881 Theobroma cacao
Thecc1EG022555 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 5653207-5654206 Theobroma cacao
Thecc1EG022555 2.0kb upstream 2.0kb upstream 5675 true scaffold_5: 5654207-5659881 Theobroma cacao
Thecc1EG022555 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 5657882-5659881 Theobroma cacao
Thecc1EG022555 2.0kb downstream 2.0kb downstream 5675 true scaffold_5: 5652207-5657881 Theobroma cacao
Thecc1EG022555 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 5652207-5654206 Theobroma cacao
Thecc1EG022555 5.0kb upstream 5.0kb upstream 8675 true scaffold_5: 5654207-5662881 Theobroma cacao
Thecc1EG022555 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 5657882-5662881 Theobroma cacao
Thecc1EG022555 5.0kb downstream 5.0kb downstream 8675 true scaffold_5: 5649207-5657881 Theobroma cacao
Thecc1EG022555 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 5649207-5654206 Theobroma cacao
Thecc1EG022555 10.0kb upstream 10.0kb upstream 13675 true scaffold_5: 5654207-5667881 Theobroma cacao
Thecc1EG022555 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 5657882-5667881 Theobroma cacao
Thecc1EG022555 10.0kb downstream 10.0kb downstream 13675 true scaffold_5: 5644207-5657881 Theobroma cacao
Thecc1EG022555 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 5644207-5654206 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123832737 5264 Brassicales-Malvales View MSA
124340614 5266 SBM View MSA
124242203 5268 Malvidae View MSA
124065582 5270 Rosid View MSA
123749643 5271 Pentapetalae View MSA
122792764 5272 Eudicot View MSA
122044931 5273 Angiosperm View MSA
121347066 5274 Embryophyte View MSA
123424467 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain