Gene : Pavir.5NG145500 P. virgatum v4.1
Defline:  (1 of 2) PTHR23315:SF65 - ARM REPEAT SUPERFAMILY PROTEIN Genomic Order:  1324
Name:  ? Pavir.5NG145500 Secondary Identifier:  ? PAC:37575083
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvirgatum PWY-7511 Panicum virgatum pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.5NG145500 0.5kb upstream 0.5kb upstream 4567 true Chr05N: 19318224-19322790 Panicum virgatum
Pavir.5NG145500 0.5kb upstream 0.5kb upstream 500 false Chr05N: 19318224-19318723 Panicum virgatum
Pavir.5NG145500 0.5kb downstream 0.5kb downstream 4567 true Chr05N: 19318724-19323290 Panicum virgatum
Pavir.5NG145500 0.5kb downstream 0.5kb downstream 500 false Chr05N: 19322791-19323290 Panicum virgatum
Pavir.5NG145500 1.0kb upstream 1.0kb upstream 5067 true Chr05N: 19317724-19322790 Panicum virgatum
Pavir.5NG145500 1.0kb upstream 1.0kb upstream 1000 false Chr05N: 19317724-19318723 Panicum virgatum
Pavir.5NG145500 1.0kb downstream 1.0kb downstream 5067 true Chr05N: 19318724-19323790 Panicum virgatum
Pavir.5NG145500 1.0kb downstream 1.0kb downstream 1000 false Chr05N: 19322791-19323790 Panicum virgatum
Pavir.5NG145500 2.0kb upstream 2.0kb upstream 6067 true Chr05N: 19316724-19322790 Panicum virgatum
Pavir.5NG145500 2.0kb upstream 2.0kb upstream 2000 false Chr05N: 19316724-19318723 Panicum virgatum
Pavir.5NG145500 2.0kb downstream 2.0kb downstream 6067 true Chr05N: 19318724-19324790 Panicum virgatum
Pavir.5NG145500 2.0kb downstream 2.0kb downstream 2000 false Chr05N: 19322791-19324790 Panicum virgatum
Pavir.5NG145500 5.0kb upstream 5.0kb upstream 9067 true Chr05N: 19313724-19322790 Panicum virgatum
Pavir.5NG145500 5.0kb upstream 5.0kb upstream 5000 false Chr05N: 19313724-19318723 Panicum virgatum
Pavir.5NG145500 5.0kb downstream 5.0kb downstream 9067 true Chr05N: 19318724-19327790 Panicum virgatum
Pavir.5NG145500 5.0kb downstream 5.0kb downstream 5000 false Chr05N: 19322791-19327790 Panicum virgatum
Pavir.5NG145500 10.0kb upstream 10.0kb upstream 14067 true Chr05N: 19308724-19322790 Panicum virgatum
Pavir.5NG145500 10.0kb upstream 10.0kb upstream 10000 false Chr05N: 19308724-19318723 Panicum virgatum
Pavir.5NG145500 10.0kb downstream 10.0kb downstream 14067 true Chr05N: 19318724-19332790 Panicum virgatum
Pavir.5NG145500 10.0kb downstream 10.0kb downstream 10000 false Chr05N: 19322791-19332790 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122198166 5267 Panicoideae View MSA
124580841 5269 Grass View MSA
122044762 5273 Angiosperm View MSA
121310337 5274 Embryophyte View MSA
123347849 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain