Gene : Pavir.5NG230300 P. virgatum v4.1
Defline:  (1 of 2) 4.2.1.55 - 3-hydroxybutyryl-CoA dehydratase / Crotonase Genomic Order:  2085
Name:  ? Pavir.5NG230300 Secondary Identifier:  ? PAC:37577207
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12 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvirgatum ILEUDEG-PWY Panicum virgatum pathologic  
Pvirgatum PWY-5136 Panicum virgatum pathologic  
Pvirgatum PWY-5137 Panicum virgatum pathologic  
Pvirgatum PWY-5138 Panicum virgatum pathologic  
Pvirgatum PWY-561 Panicum virgatum pathologic  
Pvirgatum PWY-6435 Panicum virgatum pathologic  
Pvirgatum PWY-6837 Panicum virgatum pathologic  
Pvirgatum PWY-7036 Panicum virgatum pathologic  
Pvirgatum PWY-735 Panicum virgatum pathologic  
Pvirgatum PWY-7606 Panicum virgatum pathologic  
Pvirgatum PWY-7726 Panicum virgatum pathologic  
Pvirgatum VALDEG-PWY Panicum virgatum pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.5NG230300 0.5kb upstream 0.5kb upstream 7291 true Chr05N: 32210919-32218209 Panicum virgatum
Pavir.5NG230300 0.5kb upstream 0.5kb upstream 500 false Chr05N: 32210919-32211418 Panicum virgatum
Pavir.5NG230300 0.5kb downstream 0.5kb downstream 7291 true Chr05N: 32211419-32218709 Panicum virgatum
Pavir.5NG230300 0.5kb downstream 0.5kb downstream 500 false Chr05N: 32218210-32218709 Panicum virgatum
Pavir.5NG230300 1.0kb upstream 1.0kb upstream 7791 true Chr05N: 32210419-32218209 Panicum virgatum
Pavir.5NG230300 1.0kb upstream 1.0kb upstream 1000 false Chr05N: 32210419-32211418 Panicum virgatum
Pavir.5NG230300 1.0kb downstream 1.0kb downstream 7791 true Chr05N: 32211419-32219209 Panicum virgatum
Pavir.5NG230300 1.0kb downstream 1.0kb downstream 1000 false Chr05N: 32218210-32219209 Panicum virgatum
Pavir.5NG230300 2.0kb upstream 2.0kb upstream 8791 true Chr05N: 32209419-32218209 Panicum virgatum
Pavir.5NG230300 2.0kb upstream 2.0kb upstream 2000 false Chr05N: 32209419-32211418 Panicum virgatum
Pavir.5NG230300 2.0kb downstream 2.0kb downstream 8791 true Chr05N: 32211419-32220209 Panicum virgatum
Pavir.5NG230300 2.0kb downstream 2.0kb downstream 2000 false Chr05N: 32218210-32220209 Panicum virgatum
Pavir.5NG230300 5.0kb upstream 5.0kb upstream 11791 true Chr05N: 32206419-32218209 Panicum virgatum
Pavir.5NG230300 5.0kb upstream 5.0kb upstream 5000 false Chr05N: 32206419-32211418 Panicum virgatum
Pavir.5NG230300 5.0kb downstream 5.0kb downstream 11791 true Chr05N: 32211419-32223209 Panicum virgatum
Pavir.5NG230300 5.0kb downstream 5.0kb downstream 5000 false Chr05N: 32218210-32223209 Panicum virgatum
Pavir.5NG230300 10.0kb upstream 10.0kb upstream 16791 true Chr05N: 32201419-32218209 Panicum virgatum
Pavir.5NG230300 10.0kb upstream 10.0kb upstream 10000 false Chr05N: 32201419-32211418 Panicum virgatum
Pavir.5NG230300 10.0kb downstream 10.0kb downstream 16791 true Chr05N: 32211419-32228209 Panicum virgatum
Pavir.5NG230300 10.0kb downstream 10.0kb downstream 10000 false Chr05N: 32218210-32228209 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122189446 5267 Panicoideae View MSA
124568277 5269 Grass View MSA
122047259 5273 Angiosperm View MSA
121345387 5274 Embryophyte View MSA
123424743 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain