Gene : Thecc1EG023383 T. cacao v1.1
Defline:  (1 of 1) PTHR31155:SF4 - ACYL-[ACYL-CARRIER-PROTEIN] DESATURASE 1, CHLOROPLASTIC-RELATED Genomic Order:  1120
Name:  ? Thecc1EG023383 Secondary Identifier:  ? PAC:27422699
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-5147 Theobroma cacao pathologic  
Tcacao PWY-5156 Theobroma cacao pathologic  
Tcacao PWY-5366 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG023383 0.5kb upstream 0.5kb upstream 8994 true scaffold_5: 13566964-13575957 Theobroma cacao
Thecc1EG023383 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 13575458-13575957 Theobroma cacao
Thecc1EG023383 0.5kb downstream 0.5kb downstream 8994 true scaffold_5: 13566464-13575457 Theobroma cacao
Thecc1EG023383 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 13566464-13566963 Theobroma cacao
Thecc1EG023383 1.0kb upstream 1.0kb upstream 9494 true scaffold_5: 13566964-13576457 Theobroma cacao
Thecc1EG023383 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 13575458-13576457 Theobroma cacao
Thecc1EG023383 1.0kb downstream 1.0kb downstream 9494 true scaffold_5: 13565964-13575457 Theobroma cacao
Thecc1EG023383 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 13565964-13566963 Theobroma cacao
Thecc1EG023383 2.0kb upstream 2.0kb upstream 10494 true scaffold_5: 13566964-13577457 Theobroma cacao
Thecc1EG023383 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 13575458-13577457 Theobroma cacao
Thecc1EG023383 2.0kb downstream 2.0kb downstream 10494 true scaffold_5: 13564964-13575457 Theobroma cacao
Thecc1EG023383 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 13564964-13566963 Theobroma cacao
Thecc1EG023383 5.0kb upstream 5.0kb upstream 13494 true scaffold_5: 13566964-13580457 Theobroma cacao
Thecc1EG023383 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 13575458-13580457 Theobroma cacao
Thecc1EG023383 5.0kb downstream 5.0kb downstream 13494 true scaffold_5: 13561964-13575457 Theobroma cacao
Thecc1EG023383 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 13561964-13566963 Theobroma cacao
Thecc1EG023383 10.0kb upstream 10.0kb upstream 18494 true scaffold_5: 13566964-13585457 Theobroma cacao
Thecc1EG023383 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 13575458-13585457 Theobroma cacao
Thecc1EG023383 10.0kb downstream 10.0kb downstream 18494 true scaffold_5: 13556964-13575457 Theobroma cacao
Thecc1EG023383 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 13556964-13566963 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123829168 5264 Brassicales-Malvales View MSA
124350159 5266 SBM View MSA
124243967 5268 Malvidae View MSA
124069229 5270 Rosid View MSA
123745832 5271 Pentapetalae View MSA
122789548 5272 Eudicot View MSA
122047247 5273 Angiosperm View MSA
121347152 5274 Embryophyte View MSA
123428838 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain