Gene : Pavir.5NG270200 P. virgatum v4.1
Defline:  (1 of 5) PTHR10992//PTHR10992:SF782 - ALPHA/BETA HYDROLASE FOLD-CONTAINING PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  3513
Name:  ? Pavir.5NG270200 Secondary Identifier:  ? PAC:37575643
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2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvirgatum LIPAS-PWY Panicum virgatum pathologic  
Pvirgatum PWY-7420 Panicum virgatum pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.5NG270200 0.5kb upstream 0.5kb upstream 2821 true Chr05N: 72079980-72082800 Panicum virgatum
Pavir.5NG270200 0.5kb upstream 0.5kb upstream 500 false Chr05N: 72082301-72082800 Panicum virgatum
Pavir.5NG270200 0.5kb downstream 0.5kb downstream 2821 true Chr05N: 72079480-72082300 Panicum virgatum
Pavir.5NG270200 0.5kb downstream 0.5kb downstream 500 false Chr05N: 72079480-72079979 Panicum virgatum
Pavir.5NG270200 1.0kb upstream 1.0kb upstream 3321 true Chr05N: 72079980-72083300 Panicum virgatum
Pavir.5NG270200 1.0kb upstream 1.0kb upstream 1000 false Chr05N: 72082301-72083300 Panicum virgatum
Pavir.5NG270200 1.0kb downstream 1.0kb downstream 3321 true Chr05N: 72078980-72082300 Panicum virgatum
Pavir.5NG270200 1.0kb downstream 1.0kb downstream 1000 false Chr05N: 72078980-72079979 Panicum virgatum
Pavir.5NG270200 2.0kb upstream 2.0kb upstream 4321 true Chr05N: 72079980-72084300 Panicum virgatum
Pavir.5NG270200 2.0kb upstream 2.0kb upstream 2000 false Chr05N: 72082301-72084300 Panicum virgatum
Pavir.5NG270200 2.0kb downstream 2.0kb downstream 4321 true Chr05N: 72077980-72082300 Panicum virgatum
Pavir.5NG270200 2.0kb downstream 2.0kb downstream 2000 false Chr05N: 72077980-72079979 Panicum virgatum
Pavir.5NG270200 5.0kb upstream 5.0kb upstream 7321 true Chr05N: 72079980-72087300 Panicum virgatum
Pavir.5NG270200 5.0kb upstream 5.0kb upstream 5000 false Chr05N: 72082301-72087300 Panicum virgatum
Pavir.5NG270200 5.0kb downstream 5.0kb downstream 7321 true Chr05N: 72074980-72082300 Panicum virgatum
Pavir.5NG270200 5.0kb downstream 5.0kb downstream 5000 false Chr05N: 72074980-72079979 Panicum virgatum
Pavir.5NG270200 10.0kb upstream 10.0kb upstream 12321 true Chr05N: 72079980-72092300 Panicum virgatum
Pavir.5NG270200 10.0kb upstream 10.0kb upstream 10000 false Chr05N: 72082301-72092300 Panicum virgatum
Pavir.5NG270200 10.0kb downstream 10.0kb downstream 12321 true Chr05N: 72069980-72082300 Panicum virgatum
Pavir.5NG270200 10.0kb downstream 10.0kb downstream 10000 false Chr05N: 72069980-72079979 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122180756 5267 Panicoideae View MSA
124578231 5269 Grass View MSA
122043617 5273 Angiosperm View MSA
123428977 5275 Viridiplantae View MSA
121351643 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain