Gene : Pavir.5NG300300 P. virgatum v4.1
Defline:  (1 of 2) PTHR15835:SF2 - NUCLEAR-INTERACTING PARTNER OF ALK Genomic Order:  3240
Name:  ? Pavir.5NG300300 Secondary Identifier:  ? PAC:37572793
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.5NG300300 0.5kb upstream 0.5kb upstream 5657 true Chr05N: 65085986-65091642 Panicum virgatum
Pavir.5NG300300 0.5kb upstream 0.5kb upstream 500 false Chr05N: 65091143-65091642 Panicum virgatum
Pavir.5NG300300 0.5kb downstream 0.5kb downstream 5657 true Chr05N: 65085486-65091142 Panicum virgatum
Pavir.5NG300300 0.5kb downstream 0.5kb downstream 500 false Chr05N: 65085486-65085985 Panicum virgatum
Pavir.5NG300300 1.0kb upstream 1.0kb upstream 6157 true Chr05N: 65085986-65092142 Panicum virgatum
Pavir.5NG300300 1.0kb upstream 1.0kb upstream 1000 false Chr05N: 65091143-65092142 Panicum virgatum
Pavir.5NG300300 1.0kb downstream 1.0kb downstream 6157 true Chr05N: 65084986-65091142 Panicum virgatum
Pavir.5NG300300 1.0kb downstream 1.0kb downstream 1000 false Chr05N: 65084986-65085985 Panicum virgatum
Pavir.5NG300300 2.0kb upstream 2.0kb upstream 7157 true Chr05N: 65085986-65093142 Panicum virgatum
Pavir.5NG300300 2.0kb upstream 2.0kb upstream 2000 false Chr05N: 65091143-65093142 Panicum virgatum
Pavir.5NG300300 2.0kb downstream 2.0kb downstream 7157 true Chr05N: 65083986-65091142 Panicum virgatum
Pavir.5NG300300 2.0kb downstream 2.0kb downstream 2000 false Chr05N: 65083986-65085985 Panicum virgatum
Pavir.5NG300300 5.0kb upstream 5.0kb upstream 10157 true Chr05N: 65085986-65096142 Panicum virgatum
Pavir.5NG300300 5.0kb upstream 5.0kb upstream 5000 false Chr05N: 65091143-65096142 Panicum virgatum
Pavir.5NG300300 5.0kb downstream 5.0kb downstream 10157 true Chr05N: 65080986-65091142 Panicum virgatum
Pavir.5NG300300 5.0kb downstream 5.0kb downstream 5000 false Chr05N: 65080986-65085985 Panicum virgatum
Pavir.5NG300300 10.0kb upstream 10.0kb upstream 15157 true Chr05N: 65085986-65101142 Panicum virgatum
Pavir.5NG300300 10.0kb upstream 10.0kb upstream 10000 false Chr05N: 65091143-65101142 Panicum virgatum
Pavir.5NG300300 10.0kb downstream 10.0kb downstream 15157 true Chr05N: 65075986-65091142 Panicum virgatum
Pavir.5NG300300 10.0kb downstream 10.0kb downstream 10000 false Chr05N: 65075986-65085985 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122183946 5267 Panicoideae View MSA
124576571 5269 Grass View MSA
122048012 5273 Angiosperm View MSA
121349794 5274 Embryophyte View MSA
123428489 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain