Gene : Thecc1EG023041 T. cacao v1.1
Defline:  (1 of 4) PTHR11945//PTHR11945:SF174 - MADS BOX PROTEIN // PROTEIN AGAMOUS-LIKE 48-RELATED Genomic Order:  1057
Name:  ? Thecc1EG023041 Secondary Identifier:  ? PAC:27422806
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG023041 0.5kb upstream 0.5kb upstream 4611 true scaffold_5: 10040193-10044803 Theobroma cacao
Thecc1EG023041 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 10040193-10040692 Theobroma cacao
Thecc1EG023041 0.5kb downstream 0.5kb downstream 4611 true scaffold_5: 10040693-10045303 Theobroma cacao
Thecc1EG023041 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 10044804-10045303 Theobroma cacao
Thecc1EG023041 1.0kb upstream 1.0kb upstream 5111 true scaffold_5: 10039693-10044803 Theobroma cacao
Thecc1EG023041 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 10039693-10040692 Theobroma cacao
Thecc1EG023041 1.0kb downstream 1.0kb downstream 5111 true scaffold_5: 10040693-10045803 Theobroma cacao
Thecc1EG023041 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 10044804-10045803 Theobroma cacao
Thecc1EG023041 2.0kb upstream 2.0kb upstream 6111 true scaffold_5: 10038693-10044803 Theobroma cacao
Thecc1EG023041 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 10038693-10040692 Theobroma cacao
Thecc1EG023041 2.0kb downstream 2.0kb downstream 6111 true scaffold_5: 10040693-10046803 Theobroma cacao
Thecc1EG023041 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 10044804-10046803 Theobroma cacao
Thecc1EG023041 5.0kb upstream 5.0kb upstream 9111 true scaffold_5: 10035693-10044803 Theobroma cacao
Thecc1EG023041 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 10035693-10040692 Theobroma cacao
Thecc1EG023041 5.0kb downstream 5.0kb downstream 9111 true scaffold_5: 10040693-10049803 Theobroma cacao
Thecc1EG023041 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 10044804-10049803 Theobroma cacao
Thecc1EG023041 10.0kb upstream 10.0kb upstream 14111 true scaffold_5: 10030693-10044803 Theobroma cacao
Thecc1EG023041 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 10030693-10040692 Theobroma cacao
Thecc1EG023041 10.0kb downstream 10.0kb downstream 14111 true scaffold_5: 10040693-10054803 Theobroma cacao
Thecc1EG023041 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 10044804-10054803 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123824563 5264 Brassicales-Malvales View MSA
124348574 5266 SBM View MSA
124253089 5268 Malvidae View MSA
124072156 5270 Rosid View MSA
123628095 5271 Pentapetalae View MSA
122797561 5272 Eudicot View MSA
122050867 5273 Angiosperm View MSA
121350957 5274 Embryophyte View MSA
123424057 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain