Gene : Thecc1EG022977 T. cacao v1.1
Defline:  (1 of 1) PTHR12975//PTHR12975:SF6 - TRANSPORT PROTEIN TRAPP // TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 8 Genomic Order:  1044
Name:  ? Thecc1EG022977 Secondary Identifier:  ? PAC:27421566
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG022977 0.5kb upstream 0.5kb upstream 18613 true scaffold_5: 9397158-9415770 Theobroma cacao
Thecc1EG022977 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 9397158-9397657 Theobroma cacao
Thecc1EG022977 0.5kb downstream 0.5kb downstream 18613 true scaffold_5: 9397658-9416270 Theobroma cacao
Thecc1EG022977 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 9415771-9416270 Theobroma cacao
Thecc1EG022977 1.0kb upstream 1.0kb upstream 19113 true scaffold_5: 9396658-9415770 Theobroma cacao
Thecc1EG022977 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 9396658-9397657 Theobroma cacao
Thecc1EG022977 1.0kb downstream 1.0kb downstream 19113 true scaffold_5: 9397658-9416770 Theobroma cacao
Thecc1EG022977 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 9415771-9416770 Theobroma cacao
Thecc1EG022977 2.0kb upstream 2.0kb upstream 20113 true scaffold_5: 9395658-9415770 Theobroma cacao
Thecc1EG022977 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 9395658-9397657 Theobroma cacao
Thecc1EG022977 2.0kb downstream 2.0kb downstream 20113 true scaffold_5: 9397658-9417770 Theobroma cacao
Thecc1EG022977 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 9415771-9417770 Theobroma cacao
Thecc1EG022977 5.0kb upstream 5.0kb upstream 23113 true scaffold_5: 9392658-9415770 Theobroma cacao
Thecc1EG022977 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 9392658-9397657 Theobroma cacao
Thecc1EG022977 5.0kb downstream 5.0kb downstream 23113 true scaffold_5: 9397658-9420770 Theobroma cacao
Thecc1EG022977 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 9415771-9420770 Theobroma cacao
Thecc1EG022977 10.0kb upstream 10.0kb upstream 28113 true scaffold_5: 9387658-9415770 Theobroma cacao
Thecc1EG022977 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 9387658-9397657 Theobroma cacao
Thecc1EG022977 10.0kb downstream 10.0kb downstream 28113 true scaffold_5: 9397658-9425770 Theobroma cacao
Thecc1EG022977 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 9415771-9425770 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123829271 5264 Brassicales-Malvales View MSA
124342143 5266 SBM View MSA
124239332 5268 Malvidae View MSA
124060620 5270 Rosid View MSA
123739059 5271 Pentapetalae View MSA
122789929 5272 Eudicot View MSA
122044079 5273 Angiosperm View MSA
121345213 5274 Embryophyte View MSA
123428270 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain