Gene : Thecc1EG022993 T. cacao v1.1
Defline:  (1 of 4) PTHR11945//PTHR11945:SF174 - MADS BOX PROTEIN // PROTEIN AGAMOUS-LIKE 48-RELATED Genomic Order:  1051
Name:  ? Thecc1EG022993 Secondary Identifier:  ? PAC:27422779
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG022993 0.5kb upstream 0.5kb upstream 27650 true scaffold_5: 9549461-9577110 Theobroma cacao
Thecc1EG022993 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 9549461-9549960 Theobroma cacao
Thecc1EG022993 0.5kb downstream 0.5kb downstream 27650 true scaffold_5: 9549961-9577610 Theobroma cacao
Thecc1EG022993 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 9577111-9577610 Theobroma cacao
Thecc1EG022993 1.0kb upstream 1.0kb upstream 28150 true scaffold_5: 9548961-9577110 Theobroma cacao
Thecc1EG022993 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 9548961-9549960 Theobroma cacao
Thecc1EG022993 1.0kb downstream 1.0kb downstream 28150 true scaffold_5: 9549961-9578110 Theobroma cacao
Thecc1EG022993 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 9577111-9578110 Theobroma cacao
Thecc1EG022993 2.0kb upstream 2.0kb upstream 29150 true scaffold_5: 9547961-9577110 Theobroma cacao
Thecc1EG022993 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 9547961-9549960 Theobroma cacao
Thecc1EG022993 2.0kb downstream 2.0kb downstream 29150 true scaffold_5: 9549961-9579110 Theobroma cacao
Thecc1EG022993 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 9577111-9579110 Theobroma cacao
Thecc1EG022993 5.0kb upstream 5.0kb upstream 32150 true scaffold_5: 9544961-9577110 Theobroma cacao
Thecc1EG022993 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 9544961-9549960 Theobroma cacao
Thecc1EG022993 5.0kb downstream 5.0kb downstream 32150 true scaffold_5: 9549961-9582110 Theobroma cacao
Thecc1EG022993 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 9577111-9582110 Theobroma cacao
Thecc1EG022993 10.0kb upstream 10.0kb upstream 37150 true scaffold_5: 9539961-9577110 Theobroma cacao
Thecc1EG022993 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 9539961-9549960 Theobroma cacao
Thecc1EG022993 10.0kb downstream 10.0kb downstream 37150 true scaffold_5: 9549961-9587110 Theobroma cacao
Thecc1EG022993 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 9577111-9587110 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123824563 5264 Brassicales-Malvales View MSA
124348574 5266 SBM View MSA
124253089 5268 Malvidae View MSA
124072156 5270 Rosid View MSA
123628095 5271 Pentapetalae View MSA
122797561 5272 Eudicot View MSA
122050867 5273 Angiosperm View MSA
121350957 5274 Embryophyte View MSA
123424057 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain