Gene : Pavir.5NG415900 P. virgatum v4.1

Defline:  (1 of 1) K12827 - splicing factor 3A subunit 3 (SF3A3, SAP61, PRP9) Genomic Order:  3751
Name:  ? Pavir.5NG415900 Secondary Identifier:  ? PAC:37575374

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.5NG415900 0.5kb upstream 0.5kb upstream 8628 true Chr05N: 76346427-76355054 Panicum virgatum
Pavir.5NG415900 0.5kb upstream 0.5kb upstream 500 false Chr05N: 76346427-76346926 Panicum virgatum
Pavir.5NG415900 0.5kb downstream 0.5kb downstream 8628 true Chr05N: 76346927-76355554 Panicum virgatum
Pavir.5NG415900 0.5kb downstream 0.5kb downstream 500 false Chr05N: 76355055-76355554 Panicum virgatum
Pavir.5NG415900 1.0kb upstream 1.0kb upstream 9128 true Chr05N: 76345927-76355054 Panicum virgatum
Pavir.5NG415900 1.0kb upstream 1.0kb upstream 1000 false Chr05N: 76345927-76346926 Panicum virgatum
Pavir.5NG415900 1.0kb downstream 1.0kb downstream 9128 true Chr05N: 76346927-76356054 Panicum virgatum
Pavir.5NG415900 1.0kb downstream 1.0kb downstream 1000 false Chr05N: 76355055-76356054 Panicum virgatum
Pavir.5NG415900 2.0kb upstream 2.0kb upstream 10128 true Chr05N: 76344927-76355054 Panicum virgatum
Pavir.5NG415900 2.0kb upstream 2.0kb upstream 2000 false Chr05N: 76344927-76346926 Panicum virgatum
Pavir.5NG415900 2.0kb downstream 2.0kb downstream 10128 true Chr05N: 76346927-76357054 Panicum virgatum
Pavir.5NG415900 2.0kb downstream 2.0kb downstream 2000 false Chr05N: 76355055-76357054 Panicum virgatum
Pavir.5NG415900 5.0kb upstream 5.0kb upstream 13128 true Chr05N: 76341927-76355054 Panicum virgatum
Pavir.5NG415900 5.0kb upstream 5.0kb upstream 5000 false Chr05N: 76341927-76346926 Panicum virgatum
Pavir.5NG415900 5.0kb downstream 5.0kb downstream 13128 true Chr05N: 76346927-76360054 Panicum virgatum
Pavir.5NG415900 5.0kb downstream 5.0kb downstream 5000 false Chr05N: 76355055-76360054 Panicum virgatum
Pavir.5NG415900 10.0kb upstream 10.0kb upstream 18128 true Chr05N: 76336927-76355054 Panicum virgatum
Pavir.5NG415900 10.0kb upstream 10.0kb upstream 10000 false Chr05N: 76336927-76346926 Panicum virgatum
Pavir.5NG415900 10.0kb downstream 10.0kb downstream 18128 true Chr05N: 76346927-76365054 Panicum virgatum
Pavir.5NG415900 10.0kb downstream 10.0kb downstream 10000 false Chr05N: 76355055-76365054 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122179392 5267 Panicoideae View MSA
124572098 5269 Grass View MSA
122042756 5273 Angiosperm View MSA
123429134 5275 Viridiplantae View MSA
121345552 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain