Gene : Thecc1EG022982 T. cacao v1.1
Defline:  (1 of 24) KOG0131 - Splicing factor 3b, subunit 4 Genomic Order:  1047
Name:  ? Thecc1EG022982 Secondary Identifier:  ? PAC:27420938
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG022982 0.5kb upstream 0.5kb upstream 2293 true scaffold_5: 9436799-9439091 Theobroma cacao
Thecc1EG022982 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 9438592-9439091 Theobroma cacao
Thecc1EG022982 0.5kb downstream 0.5kb downstream 2293 true scaffold_5: 9436299-9438591 Theobroma cacao
Thecc1EG022982 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 9436299-9436798 Theobroma cacao
Thecc1EG022982 1.0kb upstream 1.0kb upstream 2793 true scaffold_5: 9436799-9439591 Theobroma cacao
Thecc1EG022982 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 9438592-9439591 Theobroma cacao
Thecc1EG022982 1.0kb downstream 1.0kb downstream 2793 true scaffold_5: 9435799-9438591 Theobroma cacao
Thecc1EG022982 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 9435799-9436798 Theobroma cacao
Thecc1EG022982 2.0kb upstream 2.0kb upstream 3793 true scaffold_5: 9436799-9440591 Theobroma cacao
Thecc1EG022982 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 9438592-9440591 Theobroma cacao
Thecc1EG022982 2.0kb downstream 2.0kb downstream 3793 true scaffold_5: 9434799-9438591 Theobroma cacao
Thecc1EG022982 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 9434799-9436798 Theobroma cacao
Thecc1EG022982 5.0kb upstream 5.0kb upstream 6793 true scaffold_5: 9436799-9443591 Theobroma cacao
Thecc1EG022982 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 9438592-9443591 Theobroma cacao
Thecc1EG022982 5.0kb downstream 5.0kb downstream 6793 true scaffold_5: 9431799-9438591 Theobroma cacao
Thecc1EG022982 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 9431799-9436798 Theobroma cacao
Thecc1EG022982 10.0kb upstream 10.0kb upstream 11793 true scaffold_5: 9436799-9448591 Theobroma cacao
Thecc1EG022982 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 9438592-9448591 Theobroma cacao
Thecc1EG022982 10.0kb downstream 10.0kb downstream 11793 true scaffold_5: 9426799-9438591 Theobroma cacao
Thecc1EG022982 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 9426799-9436798 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123840822 5264 Brassicales-Malvales View MSA
124339189 5266 SBM View MSA
124243167 5268 Malvidae View MSA
124066300 5270 Rosid View MSA
123737103 5271 Pentapetalae View MSA
122792965 5272 Eudicot View MSA
122048093 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121349812 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain