Gene : Pavir.5NG406700 P. virgatum v4.1
Defline:  (1 of 4) 1.1.1.86 - Ketol-acid reductoisomerase (NADP(+)) / Dihydroxyisovalerate dehydrogenase (isomerizing) Genomic Order:  3673
Name:  ? Pavir.5NG406700 Secondary Identifier:  ? PAC:37576606
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4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvirgatum BRANCHED-CHAIN-AA-SYN-PWY Panicum virgatum pathologic  
Pvirgatum ILEUSYN-PWY Panicum virgatum pathologic  
Pvirgatum PWY-3001 Panicum virgatum pathologic  
Pvirgatum VALSYN-PWY Panicum virgatum pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.5NG406700 0.5kb upstream 0.5kb upstream 4349 true Chr05N: 75194500-75198848 Panicum virgatum
Pavir.5NG406700 0.5kb upstream 0.5kb upstream 500 false Chr05N: 75194500-75194999 Panicum virgatum
Pavir.5NG406700 0.5kb downstream 0.5kb downstream 4349 true Chr05N: 75195000-75199348 Panicum virgatum
Pavir.5NG406700 0.5kb downstream 0.5kb downstream 500 false Chr05N: 75198849-75199348 Panicum virgatum
Pavir.5NG406700 1.0kb upstream 1.0kb upstream 4849 true Chr05N: 75194000-75198848 Panicum virgatum
Pavir.5NG406700 1.0kb upstream 1.0kb upstream 1000 false Chr05N: 75194000-75194999 Panicum virgatum
Pavir.5NG406700 1.0kb downstream 1.0kb downstream 4849 true Chr05N: 75195000-75199848 Panicum virgatum
Pavir.5NG406700 1.0kb downstream 1.0kb downstream 1000 false Chr05N: 75198849-75199848 Panicum virgatum
Pavir.5NG406700 2.0kb upstream 2.0kb upstream 5849 true Chr05N: 75193000-75198848 Panicum virgatum
Pavir.5NG406700 2.0kb upstream 2.0kb upstream 2000 false Chr05N: 75193000-75194999 Panicum virgatum
Pavir.5NG406700 2.0kb downstream 2.0kb downstream 5849 true Chr05N: 75195000-75200848 Panicum virgatum
Pavir.5NG406700 2.0kb downstream 2.0kb downstream 2000 false Chr05N: 75198849-75200848 Panicum virgatum
Pavir.5NG406700 5.0kb upstream 5.0kb upstream 8849 true Chr05N: 75190000-75198848 Panicum virgatum
Pavir.5NG406700 5.0kb upstream 5.0kb upstream 5000 false Chr05N: 75190000-75194999 Panicum virgatum
Pavir.5NG406700 5.0kb downstream 5.0kb downstream 8849 true Chr05N: 75195000-75203848 Panicum virgatum
Pavir.5NG406700 5.0kb downstream 5.0kb downstream 5000 false Chr05N: 75198849-75203848 Panicum virgatum
Pavir.5NG406700 10.0kb upstream 10.0kb upstream 13849 true Chr05N: 75185000-75198848 Panicum virgatum
Pavir.5NG406700 10.0kb upstream 10.0kb upstream 10000 false Chr05N: 75185000-75194999 Panicum virgatum
Pavir.5NG406700 10.0kb downstream 10.0kb downstream 13849 true Chr05N: 75195000-75208848 Panicum virgatum
Pavir.5NG406700 10.0kb downstream 10.0kb downstream 10000 false Chr05N: 75198849-75208848 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122079580 5267 Panicoideae Singleton cluster - no MSA
124582762 5269 Grass View MSA
122043531 5273 Angiosperm View MSA
121344443 5274 Embryophyte View MSA
123428276 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain