Gene : Thecc1EG022967 T. cacao v1.1

Defline:  (1 of 24) PF02701 - Dof domain, zinc finger (zf-Dof) Genomic Order:  1039
Name:  ? Thecc1EG022967 Secondary Identifier:  ? PAC:27421246

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG022967 0.5kb upstream 0.5kb upstream 1755 true scaffold_5: 9285273-9287027 Theobroma cacao
Thecc1EG022967 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 9286528-9287027 Theobroma cacao
Thecc1EG022967 0.5kb downstream 0.5kb downstream 1755 true scaffold_5: 9284773-9286527 Theobroma cacao
Thecc1EG022967 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 9284773-9285272 Theobroma cacao
Thecc1EG022967 1.0kb upstream 1.0kb upstream 2255 true scaffold_5: 9285273-9287527 Theobroma cacao
Thecc1EG022967 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 9286528-9287527 Theobroma cacao
Thecc1EG022967 1.0kb downstream 1.0kb downstream 2255 true scaffold_5: 9284273-9286527 Theobroma cacao
Thecc1EG022967 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 9284273-9285272 Theobroma cacao
Thecc1EG022967 2.0kb upstream 2.0kb upstream 3255 true scaffold_5: 9285273-9288527 Theobroma cacao
Thecc1EG022967 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 9286528-9288527 Theobroma cacao
Thecc1EG022967 2.0kb downstream 2.0kb downstream 3255 true scaffold_5: 9283273-9286527 Theobroma cacao
Thecc1EG022967 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 9283273-9285272 Theobroma cacao
Thecc1EG022967 5.0kb upstream 5.0kb upstream 6255 true scaffold_5: 9285273-9291527 Theobroma cacao
Thecc1EG022967 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 9286528-9291527 Theobroma cacao
Thecc1EG022967 5.0kb downstream 5.0kb downstream 6255 true scaffold_5: 9280273-9286527 Theobroma cacao
Thecc1EG022967 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 9280273-9285272 Theobroma cacao
Thecc1EG022967 10.0kb upstream 10.0kb upstream 11255 true scaffold_5: 9285273-9296527 Theobroma cacao
Thecc1EG022967 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 9286528-9296527 Theobroma cacao
Thecc1EG022967 10.0kb downstream 10.0kb downstream 11255 true scaffold_5: 9275273-9286527 Theobroma cacao
Thecc1EG022967 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 9275273-9285272 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123835877 5264 Brassicales-Malvales View MSA
124341016 5266 SBM View MSA
124245851 5268 Malvidae View MSA
124068475 5270 Rosid View MSA
123744135 5271 Pentapetalae View MSA
122795829 5272 Eudicot View MSA
122050733 5273 Angiosperm View MSA
121349903 5274 Embryophyte View MSA
123427226 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain