Gene : Pavir.5NG396400 P. virgatum v4.1
Defline:  (1 of 15) 1.14.12.20 - Pheophorbide a oxygenase / Pheide a oxygenase Genomic Order:  3030
Name:  ? Pavir.5NG396400 Secondary Identifier:  ? PAC:37577361
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2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvirgatum PWY-5098 Panicum virgatum pathologic  
Pvirgatum PWY-6927 Panicum virgatum pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.5NG396400 0.5kb upstream 0.5kb upstream 1308 true Chr05N: 55949624-55950931 Panicum virgatum
Pavir.5NG396400 0.5kb upstream 0.5kb upstream 500 false Chr05N: 55949624-55950123 Panicum virgatum
Pavir.5NG396400 0.5kb downstream 0.5kb downstream 1308 true Chr05N: 55950124-55951431 Panicum virgatum
Pavir.5NG396400 0.5kb downstream 0.5kb downstream 500 false Chr05N: 55950932-55951431 Panicum virgatum
Pavir.5NG396400 1.0kb upstream 1.0kb upstream 1808 true Chr05N: 55949124-55950931 Panicum virgatum
Pavir.5NG396400 1.0kb upstream 1.0kb upstream 1000 false Chr05N: 55949124-55950123 Panicum virgatum
Pavir.5NG396400 1.0kb downstream 1.0kb downstream 1808 true Chr05N: 55950124-55951931 Panicum virgatum
Pavir.5NG396400 1.0kb downstream 1.0kb downstream 1000 false Chr05N: 55950932-55951931 Panicum virgatum
Pavir.5NG396400 2.0kb upstream 2.0kb upstream 2808 true Chr05N: 55948124-55950931 Panicum virgatum
Pavir.5NG396400 2.0kb upstream 2.0kb upstream 2000 false Chr05N: 55948124-55950123 Panicum virgatum
Pavir.5NG396400 2.0kb downstream 2.0kb downstream 2808 true Chr05N: 55950124-55952931 Panicum virgatum
Pavir.5NG396400 2.0kb downstream 2.0kb downstream 2000 false Chr05N: 55950932-55952931 Panicum virgatum
Pavir.5NG396400 5.0kb upstream 5.0kb upstream 5808 true Chr05N: 55945124-55950931 Panicum virgatum
Pavir.5NG396400 5.0kb upstream 5.0kb upstream 5000 false Chr05N: 55945124-55950123 Panicum virgatum
Pavir.5NG396400 5.0kb downstream 5.0kb downstream 5808 true Chr05N: 55950124-55955931 Panicum virgatum
Pavir.5NG396400 5.0kb downstream 5.0kb downstream 5000 false Chr05N: 55950932-55955931 Panicum virgatum
Pavir.5NG396400 10.0kb upstream 10.0kb upstream 10808 true Chr05N: 55940124-55950931 Panicum virgatum
Pavir.5NG396400 10.0kb upstream 10.0kb upstream 10000 false Chr05N: 55940124-55950123 Panicum virgatum
Pavir.5NG396400 10.0kb downstream 10.0kb downstream 10808 true Chr05N: 55950124-55960931 Panicum virgatum
Pavir.5NG396400 10.0kb downstream 10.0kb downstream 10000 false Chr05N: 55950932-55960931 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027752 5273 Angiosperm View MSA
122079790 5267 Panicoideae Singleton cluster - no MSA
124378295 5269 Grass Singleton cluster - no MSA
123429167 5275 Viridiplantae View MSA
121348668 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain