Gene : Pavir.5NG388500 P. virgatum v4.1
Defline:  (1 of 4) PTHR12741//PTHR12741:SF11 - LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1 // SUBFAMILY NOT NAMED Genomic Order:  2959
Name:  ? Pavir.5NG388500 Secondary Identifier:  ? PAC:37578370
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvirgatum PWY-6773 Panicum virgatum pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.5NG388500 0.5kb upstream 0.5kb upstream 22723 true Chr05N: 54322939-54345661 Panicum virgatum
Pavir.5NG388500 0.5kb upstream 0.5kb upstream 500 false Chr05N: 54345162-54345661 Panicum virgatum
Pavir.5NG388500 0.5kb downstream 0.5kb downstream 22723 true Chr05N: 54322439-54345161 Panicum virgatum
Pavir.5NG388500 0.5kb downstream 0.5kb downstream 500 false Chr05N: 54322439-54322938 Panicum virgatum
Pavir.5NG388500 1.0kb upstream 1.0kb upstream 23223 true Chr05N: 54322939-54346161 Panicum virgatum
Pavir.5NG388500 1.0kb upstream 1.0kb upstream 1000 false Chr05N: 54345162-54346161 Panicum virgatum
Pavir.5NG388500 1.0kb downstream 1.0kb downstream 23223 true Chr05N: 54321939-54345161 Panicum virgatum
Pavir.5NG388500 1.0kb downstream 1.0kb downstream 1000 false Chr05N: 54321939-54322938 Panicum virgatum
Pavir.5NG388500 2.0kb upstream 2.0kb upstream 24223 true Chr05N: 54322939-54347161 Panicum virgatum
Pavir.5NG388500 2.0kb upstream 2.0kb upstream 2000 false Chr05N: 54345162-54347161 Panicum virgatum
Pavir.5NG388500 2.0kb downstream 2.0kb downstream 24223 true Chr05N: 54320939-54345161 Panicum virgatum
Pavir.5NG388500 2.0kb downstream 2.0kb downstream 2000 false Chr05N: 54320939-54322938 Panicum virgatum
Pavir.5NG388500 5.0kb upstream 5.0kb upstream 27223 true Chr05N: 54322939-54350161 Panicum virgatum
Pavir.5NG388500 5.0kb upstream 5.0kb upstream 5000 false Chr05N: 54345162-54350161 Panicum virgatum
Pavir.5NG388500 5.0kb downstream 5.0kb downstream 27223 true Chr05N: 54317939-54345161 Panicum virgatum
Pavir.5NG388500 5.0kb downstream 5.0kb downstream 5000 false Chr05N: 54317939-54322938 Panicum virgatum
Pavir.5NG388500 10.0kb upstream 10.0kb upstream 32223 true Chr05N: 54322939-54355161 Panicum virgatum
Pavir.5NG388500 10.0kb upstream 10.0kb upstream 10000 false Chr05N: 54345162-54355161 Panicum virgatum
Pavir.5NG388500 10.0kb downstream 10.0kb downstream 32223 true Chr05N: 54312939-54345161 Panicum virgatum
Pavir.5NG388500 10.0kb downstream 10.0kb downstream 10000 false Chr05N: 54312939-54322938 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122181169 5267 Panicoideae View MSA
124581568 5269 Grass View MSA
122042706 5273 Angiosperm View MSA
121310004 5274 Embryophyte View MSA
123428420 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain