Gene : Pavir.5NG473600 P. virgatum v4.1
Defline:  (1 of 2) PTHR10210:SF45 - RIBOSE-PHOSPHATE PYROPHOSPHOKINASE 3, CHLOROPLASTIC Genomic Order:  4289
Name:  ? Pavir.5NG473600 Secondary Identifier:  ? PAC:37573252
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvirgatum PWY0-662 Panicum virgatum pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.5NG473600 0.5kb upstream 0.5kb upstream 4398 true Chr05N: 84478792-84483189 Panicum virgatum
Pavir.5NG473600 0.5kb upstream 0.5kb upstream 500 false Chr05N: 84478792-84479291 Panicum virgatum
Pavir.5NG473600 0.5kb downstream 0.5kb downstream 4398 true Chr05N: 84479292-84483689 Panicum virgatum
Pavir.5NG473600 0.5kb downstream 0.5kb downstream 500 false Chr05N: 84483190-84483689 Panicum virgatum
Pavir.5NG473600 1.0kb upstream 1.0kb upstream 4898 true Chr05N: 84478292-84483189 Panicum virgatum
Pavir.5NG473600 1.0kb upstream 1.0kb upstream 1000 false Chr05N: 84478292-84479291 Panicum virgatum
Pavir.5NG473600 1.0kb downstream 1.0kb downstream 4898 true Chr05N: 84479292-84484189 Panicum virgatum
Pavir.5NG473600 1.0kb downstream 1.0kb downstream 1000 false Chr05N: 84483190-84484189 Panicum virgatum
Pavir.5NG473600 2.0kb upstream 2.0kb upstream 5898 true Chr05N: 84477292-84483189 Panicum virgatum
Pavir.5NG473600 2.0kb upstream 2.0kb upstream 2000 false Chr05N: 84477292-84479291 Panicum virgatum
Pavir.5NG473600 2.0kb downstream 2.0kb downstream 5898 true Chr05N: 84479292-84485189 Panicum virgatum
Pavir.5NG473600 2.0kb downstream 2.0kb downstream 2000 false Chr05N: 84483190-84485189 Panicum virgatum
Pavir.5NG473600 5.0kb upstream 5.0kb upstream 8898 true Chr05N: 84474292-84483189 Panicum virgatum
Pavir.5NG473600 5.0kb upstream 5.0kb upstream 5000 false Chr05N: 84474292-84479291 Panicum virgatum
Pavir.5NG473600 5.0kb downstream 5.0kb downstream 8898 true Chr05N: 84479292-84488189 Panicum virgatum
Pavir.5NG473600 5.0kb downstream 5.0kb downstream 5000 false Chr05N: 84483190-84488189 Panicum virgatum
Pavir.5NG473600 10.0kb upstream 10.0kb upstream 13898 true Chr05N: 84469292-84483189 Panicum virgatum
Pavir.5NG473600 10.0kb upstream 10.0kb upstream 10000 false Chr05N: 84469292-84479291 Panicum virgatum
Pavir.5NG473600 10.0kb downstream 10.0kb downstream 13898 true Chr05N: 84479292-84493189 Panicum virgatum
Pavir.5NG473600 10.0kb downstream 10.0kb downstream 10000 false Chr05N: 84483190-84493189 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122078731 5267 Panicoideae Singleton cluster - no MSA
124584463 5269 Grass View MSA
122048410 5273 Angiosperm View MSA
121347977 5274 Embryophyte View MSA
123424356 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain