Gene : Pavir.5NG467500 P. virgatum v4.1
Defline:  (1 of 4) K04718 - sphingosine kinase (SPHK) Genomic Order:  3921
Name:  ? Pavir.5NG467500 Secondary Identifier:  ? PAC:37575904
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2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvirgatum PWY-5129 Panicum virgatum pathologic  
Pvirgatum PWY-6483 Panicum virgatum pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.5NG467500 0.5kb upstream 0.5kb upstream 4905 true Chr05N: 79178056-79182960 Panicum virgatum
Pavir.5NG467500 0.5kb upstream 0.5kb upstream 500 false Chr05N: 79178056-79178555 Panicum virgatum
Pavir.5NG467500 0.5kb downstream 0.5kb downstream 4905 true Chr05N: 79178556-79183460 Panicum virgatum
Pavir.5NG467500 0.5kb downstream 0.5kb downstream 500 false Chr05N: 79182961-79183460 Panicum virgatum
Pavir.5NG467500 1.0kb upstream 1.0kb upstream 5405 true Chr05N: 79177556-79182960 Panicum virgatum
Pavir.5NG467500 1.0kb upstream 1.0kb upstream 1000 false Chr05N: 79177556-79178555 Panicum virgatum
Pavir.5NG467500 1.0kb downstream 1.0kb downstream 5405 true Chr05N: 79178556-79183960 Panicum virgatum
Pavir.5NG467500 1.0kb downstream 1.0kb downstream 1000 false Chr05N: 79182961-79183960 Panicum virgatum
Pavir.5NG467500 2.0kb upstream 2.0kb upstream 6405 true Chr05N: 79176556-79182960 Panicum virgatum
Pavir.5NG467500 2.0kb upstream 2.0kb upstream 2000 false Chr05N: 79176556-79178555 Panicum virgatum
Pavir.5NG467500 2.0kb downstream 2.0kb downstream 6405 true Chr05N: 79178556-79184960 Panicum virgatum
Pavir.5NG467500 2.0kb downstream 2.0kb downstream 2000 false Chr05N: 79182961-79184960 Panicum virgatum
Pavir.5NG467500 5.0kb upstream 5.0kb upstream 9405 true Chr05N: 79173556-79182960 Panicum virgatum
Pavir.5NG467500 5.0kb upstream 5.0kb upstream 5000 false Chr05N: 79173556-79178555 Panicum virgatum
Pavir.5NG467500 5.0kb downstream 5.0kb downstream 9405 true Chr05N: 79178556-79187960 Panicum virgatum
Pavir.5NG467500 5.0kb downstream 5.0kb downstream 5000 false Chr05N: 79182961-79187960 Panicum virgatum
Pavir.5NG467500 10.0kb upstream 10.0kb upstream 14405 true Chr05N: 79168556-79182960 Panicum virgatum
Pavir.5NG467500 10.0kb upstream 10.0kb upstream 10000 false Chr05N: 79168556-79178555 Panicum virgatum
Pavir.5NG467500 10.0kb downstream 10.0kb downstream 14405 true Chr05N: 79178556-79192960 Panicum virgatum
Pavir.5NG467500 10.0kb downstream 10.0kb downstream 10000 false Chr05N: 79182961-79192960 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122176509 5267 Panicoideae View MSA
124568835 5269 Grass View MSA
122045440 5273 Angiosperm View MSA
121350923 5274 Embryophyte View MSA
123428396 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain