Gene : Thecc1EG022929 T. cacao v1.1

Defline:  (1 of 1) K14842 - ribosome biogenesis protein NSA2 (NSA2) Genomic Order:  1025
Name:  ? Thecc1EG022929 Secondary Identifier:  ? PAC:27422337

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG022929 0.5kb upstream 0.5kb upstream 5808 true scaffold_5: 8897394-8903201 Theobroma cacao
Thecc1EG022929 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 8897394-8897893 Theobroma cacao
Thecc1EG022929 0.5kb downstream 0.5kb downstream 5808 true scaffold_5: 8897894-8903701 Theobroma cacao
Thecc1EG022929 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 8903202-8903701 Theobroma cacao
Thecc1EG022929 1.0kb upstream 1.0kb upstream 6308 true scaffold_5: 8896894-8903201 Theobroma cacao
Thecc1EG022929 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 8896894-8897893 Theobroma cacao
Thecc1EG022929 1.0kb downstream 1.0kb downstream 6308 true scaffold_5: 8897894-8904201 Theobroma cacao
Thecc1EG022929 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 8903202-8904201 Theobroma cacao
Thecc1EG022929 2.0kb upstream 2.0kb upstream 7308 true scaffold_5: 8895894-8903201 Theobroma cacao
Thecc1EG022929 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 8895894-8897893 Theobroma cacao
Thecc1EG022929 2.0kb downstream 2.0kb downstream 7308 true scaffold_5: 8897894-8905201 Theobroma cacao
Thecc1EG022929 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 8903202-8905201 Theobroma cacao
Thecc1EG022929 5.0kb upstream 5.0kb upstream 10308 true scaffold_5: 8892894-8903201 Theobroma cacao
Thecc1EG022929 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 8892894-8897893 Theobroma cacao
Thecc1EG022929 5.0kb downstream 5.0kb downstream 10308 true scaffold_5: 8897894-8908201 Theobroma cacao
Thecc1EG022929 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 8903202-8908201 Theobroma cacao
Thecc1EG022929 10.0kb upstream 10.0kb upstream 15308 true scaffold_5: 8887894-8903201 Theobroma cacao
Thecc1EG022929 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 8887894-8897893 Theobroma cacao
Thecc1EG022929 10.0kb downstream 10.0kb downstream 15308 true scaffold_5: 8897894-8913201 Theobroma cacao
Thecc1EG022929 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 8903202-8913201 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123840200 5264 Brassicales-Malvales View MSA
124341411 5266 SBM View MSA
124241958 5268 Malvidae View MSA
124061580 5270 Rosid View MSA
123741663 5271 Pentapetalae View MSA
122796329 5272 Eudicot View MSA
122043464 5273 Angiosperm View MSA
121344863 5274 Embryophyte View MSA
123424224 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain