Gene : Thecc1EG022917 T. cacao v1.1
Defline:  Hydroxyproline-rich glycoprotein family protein Genomic Order:  1014
Name:  ? Thecc1EG022917 Secondary Identifier:  ? PAC:27423528
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG022917 0.5kb upstream 0.5kb upstream 2145 true scaffold_5: 8803732-8805876 Theobroma cacao
Thecc1EG022917 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 8805377-8805876 Theobroma cacao
Thecc1EG022917 0.5kb downstream 0.5kb downstream 2145 true scaffold_5: 8803232-8805376 Theobroma cacao
Thecc1EG022917 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 8803232-8803731 Theobroma cacao
Thecc1EG022917 1.0kb upstream 1.0kb upstream 2645 true scaffold_5: 8803732-8806376 Theobroma cacao
Thecc1EG022917 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 8805377-8806376 Theobroma cacao
Thecc1EG022917 1.0kb downstream 1.0kb downstream 2645 true scaffold_5: 8802732-8805376 Theobroma cacao
Thecc1EG022917 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 8802732-8803731 Theobroma cacao
Thecc1EG022917 2.0kb upstream 2.0kb upstream 3645 true scaffold_5: 8803732-8807376 Theobroma cacao
Thecc1EG022917 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 8805377-8807376 Theobroma cacao
Thecc1EG022917 2.0kb downstream 2.0kb downstream 3645 true scaffold_5: 8801732-8805376 Theobroma cacao
Thecc1EG022917 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 8801732-8803731 Theobroma cacao
Thecc1EG022917 5.0kb upstream 5.0kb upstream 6645 true scaffold_5: 8803732-8810376 Theobroma cacao
Thecc1EG022917 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 8805377-8810376 Theobroma cacao
Thecc1EG022917 5.0kb downstream 5.0kb downstream 6645 true scaffold_5: 8798732-8805376 Theobroma cacao
Thecc1EG022917 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 8798732-8803731 Theobroma cacao
Thecc1EG022917 10.0kb upstream 10.0kb upstream 11645 true scaffold_5: 8803732-8815376 Theobroma cacao
Thecc1EG022917 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 8805377-8815376 Theobroma cacao
Thecc1EG022917 10.0kb downstream 10.0kb downstream 11645 true scaffold_5: 8793732-8805376 Theobroma cacao
Thecc1EG022917 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 8793732-8803731 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123824749 5264 Brassicales-Malvales View MSA
124320315 5266 SBM View MSA
124248521 5268 Malvidae View MSA
124050487 5270 Rosid View MSA
123741970 5271 Pentapetalae View MSA
122797566 5272 Eudicot View MSA
122045519 5273 Angiosperm View MSA
121310460 5274 Embryophyte View MSA
123347936 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain