Gene : Pavir.5NG522500 P. virgatum v4.1
Defline:  (1 of 6) PTHR12565//PTHR12565:SF164 - STEROL REGULATORY ELEMENT-BINDING PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  4737
Name:  ? Pavir.5NG522500 Secondary Identifier:  ? PAC:37573096
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.5NG522500 0.5kb upstream 0.5kb upstream 1898 true Chr05N: 88671980-88673877 Panicum virgatum
Pavir.5NG522500 0.5kb upstream 0.5kb upstream 500 false Chr05N: 88671980-88672479 Panicum virgatum
Pavir.5NG522500 0.5kb downstream 0.5kb downstream 1898 true Chr05N: 88672480-88674377 Panicum virgatum
Pavir.5NG522500 0.5kb downstream 0.5kb downstream 500 false Chr05N: 88673878-88674377 Panicum virgatum
Pavir.5NG522500 1.0kb upstream 1.0kb upstream 2398 true Chr05N: 88671480-88673877 Panicum virgatum
Pavir.5NG522500 1.0kb upstream 1.0kb upstream 1000 false Chr05N: 88671480-88672479 Panicum virgatum
Pavir.5NG522500 1.0kb downstream 1.0kb downstream 2398 true Chr05N: 88672480-88674877 Panicum virgatum
Pavir.5NG522500 1.0kb downstream 1.0kb downstream 1000 false Chr05N: 88673878-88674877 Panicum virgatum
Pavir.5NG522500 2.0kb upstream 2.0kb upstream 3398 true Chr05N: 88670480-88673877 Panicum virgatum
Pavir.5NG522500 2.0kb upstream 2.0kb upstream 2000 false Chr05N: 88670480-88672479 Panicum virgatum
Pavir.5NG522500 2.0kb downstream 2.0kb downstream 3398 true Chr05N: 88672480-88675877 Panicum virgatum
Pavir.5NG522500 2.0kb downstream 2.0kb downstream 2000 false Chr05N: 88673878-88675877 Panicum virgatum
Pavir.5NG522500 5.0kb upstream 5.0kb upstream 6398 true Chr05N: 88667480-88673877 Panicum virgatum
Pavir.5NG522500 5.0kb upstream 5.0kb upstream 5000 false Chr05N: 88667480-88672479 Panicum virgatum
Pavir.5NG522500 5.0kb downstream 5.0kb downstream 6398 true Chr05N: 88672480-88678877 Panicum virgatum
Pavir.5NG522500 5.0kb downstream 5.0kb downstream 5000 false Chr05N: 88673878-88678877 Panicum virgatum
Pavir.5NG522500 10.0kb upstream 10.0kb upstream 11398 true Chr05N: 88662480-88673877 Panicum virgatum
Pavir.5NG522500 10.0kb upstream 10.0kb upstream 10000 false Chr05N: 88662480-88672479 Panicum virgatum
Pavir.5NG522500 10.0kb downstream 10.0kb downstream 11398 true Chr05N: 88672480-88683877 Panicum virgatum
Pavir.5NG522500 10.0kb downstream 10.0kb downstream 10000 false Chr05N: 88673878-88683877 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122177384 5267 Panicoideae View MSA
124586763 5269 Grass View MSA
122043534 5273 Angiosperm View MSA
121351451 5274 Embryophyte View MSA
123428440 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain