Gene : Thecc1EG024167 T. cacao v1.1
Defline:  Integrase-like protein (15%U) Genomic Order:  1321
Name:  ? Thecc1EG024167 Secondary Identifier:  ? PAC:27421358
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG024167 0.5kb upstream 0.5kb upstream 3371 true scaffold_5: 22793333-22796703 Theobroma cacao
Thecc1EG024167 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 22793333-22793832 Theobroma cacao
Thecc1EG024167 0.5kb downstream 0.5kb downstream 3371 true scaffold_5: 22793833-22797203 Theobroma cacao
Thecc1EG024167 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 22796704-22797203 Theobroma cacao
Thecc1EG024167 1.0kb upstream 1.0kb upstream 3871 true scaffold_5: 22792833-22796703 Theobroma cacao
Thecc1EG024167 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 22792833-22793832 Theobroma cacao
Thecc1EG024167 1.0kb downstream 1.0kb downstream 3871 true scaffold_5: 22793833-22797703 Theobroma cacao
Thecc1EG024167 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 22796704-22797703 Theobroma cacao
Thecc1EG024167 2.0kb upstream 2.0kb upstream 4871 true scaffold_5: 22791833-22796703 Theobroma cacao
Thecc1EG024167 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 22791833-22793832 Theobroma cacao
Thecc1EG024167 2.0kb downstream 2.0kb downstream 4871 true scaffold_5: 22793833-22798703 Theobroma cacao
Thecc1EG024167 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 22796704-22798703 Theobroma cacao
Thecc1EG024167 5.0kb upstream 5.0kb upstream 7871 true scaffold_5: 22788833-22796703 Theobroma cacao
Thecc1EG024167 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 22788833-22793832 Theobroma cacao
Thecc1EG024167 5.0kb downstream 5.0kb downstream 7871 true scaffold_5: 22793833-22801703 Theobroma cacao
Thecc1EG024167 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 22796704-22801703 Theobroma cacao
Thecc1EG024167 10.0kb upstream 10.0kb upstream 12871 true scaffold_5: 22783833-22796703 Theobroma cacao
Thecc1EG024167 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 22783833-22793832 Theobroma cacao
Thecc1EG024167 10.0kb downstream 10.0kb downstream 12871 true scaffold_5: 22793833-22806703 Theobroma cacao
Thecc1EG024167 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 22796704-22806703 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123820548 5264 Brassicales-Malvales Singleton cluster - no MSA
124316758 5266 SBM Singleton cluster - no MSA
124165558 5268 Malvidae Singleton cluster - no MSA
123889231 5270 Rosid Singleton cluster - no MSA
123753147 5271 Pentapetalae View MSA
122797842 5272 Eudicot View MSA
122048825 5273 Angiosperm View MSA
121351710 5274 Embryophyte View MSA
123427809 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain