Gene : Thecc1EG024174 T. cacao v1.1
Defline:  (1 of 1) PTHR22600//PTHR22600:SF18 - BETA-HEXOSAMINIDASE // SUBFAMILY NOT NAMED Genomic Order:  1326
Name:  ? Thecc1EG024174 Secondary Identifier:  ? PAC:27422828
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-6902 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG024174 0.5kb upstream 0.5kb upstream 37859 true scaffold_5: 22846893-22884751 Theobroma cacao
Thecc1EG024174 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 22846893-22847392 Theobroma cacao
Thecc1EG024174 0.5kb downstream 0.5kb downstream 37859 true scaffold_5: 22847393-22885251 Theobroma cacao
Thecc1EG024174 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 22884752-22885251 Theobroma cacao
Thecc1EG024174 1.0kb upstream 1.0kb upstream 38359 true scaffold_5: 22846393-22884751 Theobroma cacao
Thecc1EG024174 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 22846393-22847392 Theobroma cacao
Thecc1EG024174 1.0kb downstream 1.0kb downstream 38359 true scaffold_5: 22847393-22885751 Theobroma cacao
Thecc1EG024174 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 22884752-22885751 Theobroma cacao
Thecc1EG024174 2.0kb upstream 2.0kb upstream 39359 true scaffold_5: 22845393-22884751 Theobroma cacao
Thecc1EG024174 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 22845393-22847392 Theobroma cacao
Thecc1EG024174 2.0kb downstream 2.0kb downstream 39359 true scaffold_5: 22847393-22886751 Theobroma cacao
Thecc1EG024174 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 22884752-22886751 Theobroma cacao
Thecc1EG024174 5.0kb upstream 5.0kb upstream 42359 true scaffold_5: 22842393-22884751 Theobroma cacao
Thecc1EG024174 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 22842393-22847392 Theobroma cacao
Thecc1EG024174 5.0kb downstream 5.0kb downstream 42359 true scaffold_5: 22847393-22889751 Theobroma cacao
Thecc1EG024174 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 22884752-22889751 Theobroma cacao
Thecc1EG024174 10.0kb upstream 10.0kb upstream 47359 true scaffold_5: 22837393-22884751 Theobroma cacao
Thecc1EG024174 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 22837393-22847392 Theobroma cacao
Thecc1EG024174 10.0kb downstream 10.0kb downstream 47359 true scaffold_5: 22847393-22894751 Theobroma cacao
Thecc1EG024174 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 22884752-22894751 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123829142 5264 Brassicales-Malvales View MSA
124337219 5266 SBM View MSA
124240714 5268 Malvidae View MSA
124068580 5270 Rosid View MSA
123738133 5271 Pentapetalae View MSA
122790534 5272 Eudicot View MSA
122047167 5273 Angiosperm View MSA
121346826 5274 Embryophyte View MSA
123428053 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain