Gene : Pavir.5NG491200 P. virgatum v4.1
Defline:  (1 of 2) PTHR10055:SF9 - PROTEIN OVULE ABORTION 4 Genomic Order:  4450
Name:  ? Pavir.5NG491200 Secondary Identifier:  ? PAC:37574560
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvirgatum TRNA-CHARGING-PWY Panicum virgatum pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.5NG491200 0.5kb upstream 0.5kb upstream 6065 true Chr05N: 85958899-85964963 Panicum virgatum
Pavir.5NG491200 0.5kb upstream 0.5kb upstream 500 false Chr05N: 85964464-85964963 Panicum virgatum
Pavir.5NG491200 0.5kb downstream 0.5kb downstream 6065 true Chr05N: 85958399-85964463 Panicum virgatum
Pavir.5NG491200 0.5kb downstream 0.5kb downstream 500 false Chr05N: 85958399-85958898 Panicum virgatum
Pavir.5NG491200 1.0kb upstream 1.0kb upstream 6565 true Chr05N: 85958899-85965463 Panicum virgatum
Pavir.5NG491200 1.0kb upstream 1.0kb upstream 1000 false Chr05N: 85964464-85965463 Panicum virgatum
Pavir.5NG491200 1.0kb downstream 1.0kb downstream 6565 true Chr05N: 85957899-85964463 Panicum virgatum
Pavir.5NG491200 1.0kb downstream 1.0kb downstream 1000 false Chr05N: 85957899-85958898 Panicum virgatum
Pavir.5NG491200 2.0kb upstream 2.0kb upstream 7565 true Chr05N: 85958899-85966463 Panicum virgatum
Pavir.5NG491200 2.0kb upstream 2.0kb upstream 2000 false Chr05N: 85964464-85966463 Panicum virgatum
Pavir.5NG491200 2.0kb downstream 2.0kb downstream 7565 true Chr05N: 85956899-85964463 Panicum virgatum
Pavir.5NG491200 2.0kb downstream 2.0kb downstream 2000 false Chr05N: 85956899-85958898 Panicum virgatum
Pavir.5NG491200 5.0kb upstream 5.0kb upstream 10565 true Chr05N: 85958899-85969463 Panicum virgatum
Pavir.5NG491200 5.0kb upstream 5.0kb upstream 5000 false Chr05N: 85964464-85969463 Panicum virgatum
Pavir.5NG491200 5.0kb downstream 5.0kb downstream 10565 true Chr05N: 85953899-85964463 Panicum virgatum
Pavir.5NG491200 5.0kb downstream 5.0kb downstream 5000 false Chr05N: 85953899-85958898 Panicum virgatum
Pavir.5NG491200 10.0kb upstream 10.0kb upstream 15565 true Chr05N: 85958899-85974463 Panicum virgatum
Pavir.5NG491200 10.0kb upstream 10.0kb upstream 10000 false Chr05N: 85964464-85974463 Panicum virgatum
Pavir.5NG491200 10.0kb downstream 10.0kb downstream 15565 true Chr05N: 85948899-85964463 Panicum virgatum
Pavir.5NG491200 10.0kb downstream 10.0kb downstream 10000 false Chr05N: 85948899-85958898 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122194918 5267 Panicoideae View MSA
124576484 5269 Grass View MSA
122047133 5273 Angiosperm View MSA
121345289 5274 Embryophyte View MSA
123423978 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain