Gene : Pavir.5NG546900 P. virgatum v4.1
Defline:  (1 of 3) PTHR12838 - U3 SMALL NUCLEOLAR RNA-ASSOCIATED PROTEIN 11 Genomic Order:  4952
Name:  ? Pavir.5NG546900 Secondary Identifier:  ? PAC:37578079
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.5NG546900 0.5kb upstream 0.5kb upstream 3684 true Chr05N: 90729247-90732930 Panicum virgatum
Pavir.5NG546900 0.5kb upstream 0.5kb upstream 500 false Chr05N: 90732431-90732930 Panicum virgatum
Pavir.5NG546900 0.5kb downstream 0.5kb downstream 3684 true Chr05N: 90728747-90732430 Panicum virgatum
Pavir.5NG546900 0.5kb downstream 0.5kb downstream 500 false Chr05N: 90728747-90729246 Panicum virgatum
Pavir.5NG546900 1.0kb upstream 1.0kb upstream 4184 true Chr05N: 90729247-90733430 Panicum virgatum
Pavir.5NG546900 1.0kb upstream 1.0kb upstream 1000 false Chr05N: 90732431-90733430 Panicum virgatum
Pavir.5NG546900 1.0kb downstream 1.0kb downstream 4184 true Chr05N: 90728247-90732430 Panicum virgatum
Pavir.5NG546900 1.0kb downstream 1.0kb downstream 1000 false Chr05N: 90728247-90729246 Panicum virgatum
Pavir.5NG546900 2.0kb upstream 2.0kb upstream 5184 true Chr05N: 90729247-90734430 Panicum virgatum
Pavir.5NG546900 2.0kb upstream 2.0kb upstream 2000 false Chr05N: 90732431-90734430 Panicum virgatum
Pavir.5NG546900 2.0kb downstream 2.0kb downstream 5184 true Chr05N: 90727247-90732430 Panicum virgatum
Pavir.5NG546900 2.0kb downstream 2.0kb downstream 2000 false Chr05N: 90727247-90729246 Panicum virgatum
Pavir.5NG546900 5.0kb upstream 5.0kb upstream 8184 true Chr05N: 90729247-90737430 Panicum virgatum
Pavir.5NG546900 5.0kb upstream 5.0kb upstream 5000 false Chr05N: 90732431-90737430 Panicum virgatum
Pavir.5NG546900 5.0kb downstream 5.0kb downstream 8184 true Chr05N: 90724247-90732430 Panicum virgatum
Pavir.5NG546900 5.0kb downstream 5.0kb downstream 5000 false Chr05N: 90724247-90729246 Panicum virgatum
Pavir.5NG546900 10.0kb upstream 10.0kb upstream 13184 true Chr05N: 90729247-90742430 Panicum virgatum
Pavir.5NG546900 10.0kb upstream 10.0kb upstream 10000 false Chr05N: 90732431-90742430 Panicum virgatum
Pavir.5NG546900 10.0kb downstream 10.0kb downstream 13184 true Chr05N: 90719247-90732430 Panicum virgatum
Pavir.5NG546900 10.0kb downstream 10.0kb downstream 10000 false Chr05N: 90719247-90729246 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122079965 5267 Panicoideae Singleton cluster - no MSA
124378450 5269 Grass Singleton cluster - no MSA
122051438 5273 Angiosperm View MSA
121350042 5274 Embryophyte View MSA
123425029 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain