Gene : Thecc1EG024082 T. cacao v1.1
Defline:  (1 of 2) PTHR16201:SF34 - LYSOSOMAL AMINO ACID TRANSPORTER 1 Genomic Order:  1295
Name:  ? Thecc1EG024082 Secondary Identifier:  ? PAC:27424391
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG024082 0.5kb upstream 0.5kb upstream 8332 true scaffold_5: 22022782-22031113 Theobroma cacao
Thecc1EG024082 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 22022782-22023281 Theobroma cacao
Thecc1EG024082 0.5kb downstream 0.5kb downstream 8332 true scaffold_5: 22023282-22031613 Theobroma cacao
Thecc1EG024082 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 22031114-22031613 Theobroma cacao
Thecc1EG024082 1.0kb upstream 1.0kb upstream 8832 true scaffold_5: 22022282-22031113 Theobroma cacao
Thecc1EG024082 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 22022282-22023281 Theobroma cacao
Thecc1EG024082 1.0kb downstream 1.0kb downstream 8832 true scaffold_5: 22023282-22032113 Theobroma cacao
Thecc1EG024082 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 22031114-22032113 Theobroma cacao
Thecc1EG024082 2.0kb upstream 2.0kb upstream 9832 true scaffold_5: 22021282-22031113 Theobroma cacao
Thecc1EG024082 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 22021282-22023281 Theobroma cacao
Thecc1EG024082 2.0kb downstream 2.0kb downstream 9832 true scaffold_5: 22023282-22033113 Theobroma cacao
Thecc1EG024082 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 22031114-22033113 Theobroma cacao
Thecc1EG024082 5.0kb upstream 5.0kb upstream 12832 true scaffold_5: 22018282-22031113 Theobroma cacao
Thecc1EG024082 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 22018282-22023281 Theobroma cacao
Thecc1EG024082 5.0kb downstream 5.0kb downstream 12832 true scaffold_5: 22023282-22036113 Theobroma cacao
Thecc1EG024082 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 22031114-22036113 Theobroma cacao
Thecc1EG024082 10.0kb upstream 10.0kb upstream 17832 true scaffold_5: 22013282-22031113 Theobroma cacao
Thecc1EG024082 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 22013282-22023281 Theobroma cacao
Thecc1EG024082 10.0kb downstream 10.0kb downstream 17832 true scaffold_5: 22023282-22041113 Theobroma cacao
Thecc1EG024082 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 22031114-22041113 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123831425 5264 Brassicales-Malvales View MSA
124337440 5266 SBM View MSA
124247637 5268 Malvidae View MSA
124071732 5270 Rosid View MSA
123744314 5271 Pentapetalae View MSA
122789645 5272 Eudicot View MSA
122043599 5273 Angiosperm View MSA
121344706 5274 Embryophyte View MSA
123427265 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain