Gene : Pavir.5NG538800 P. virgatum v4.1
Defline:  (1 of 2) K01094 - phosphatidylglycerophosphatase GEP4 (GEP4) Genomic Order:  4880
Name:  ? Pavir.5NG538800 Secondary Identifier:  ? PAC:37571700
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2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvirgatum PWY4FS-7 Panicum virgatum pathologic  
Pvirgatum PWY-5269 Panicum virgatum pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.5NG538800 0.5kb upstream 0.5kb upstream 3111 true Chr05N: 90037705-90040815 Panicum virgatum
Pavir.5NG538800 0.5kb upstream 0.5kb upstream 500 false Chr05N: 90040316-90040815 Panicum virgatum
Pavir.5NG538800 0.5kb downstream 0.5kb downstream 3111 true Chr05N: 90037205-90040315 Panicum virgatum
Pavir.5NG538800 0.5kb downstream 0.5kb downstream 500 false Chr05N: 90037205-90037704 Panicum virgatum
Pavir.5NG538800 1.0kb upstream 1.0kb upstream 3611 true Chr05N: 90037705-90041315 Panicum virgatum
Pavir.5NG538800 1.0kb upstream 1.0kb upstream 1000 false Chr05N: 90040316-90041315 Panicum virgatum
Pavir.5NG538800 1.0kb downstream 1.0kb downstream 3611 true Chr05N: 90036705-90040315 Panicum virgatum
Pavir.5NG538800 1.0kb downstream 1.0kb downstream 1000 false Chr05N: 90036705-90037704 Panicum virgatum
Pavir.5NG538800 2.0kb upstream 2.0kb upstream 4611 true Chr05N: 90037705-90042315 Panicum virgatum
Pavir.5NG538800 2.0kb upstream 2.0kb upstream 2000 false Chr05N: 90040316-90042315 Panicum virgatum
Pavir.5NG538800 2.0kb downstream 2.0kb downstream 4611 true Chr05N: 90035705-90040315 Panicum virgatum
Pavir.5NG538800 2.0kb downstream 2.0kb downstream 2000 false Chr05N: 90035705-90037704 Panicum virgatum
Pavir.5NG538800 5.0kb upstream 5.0kb upstream 7611 true Chr05N: 90037705-90045315 Panicum virgatum
Pavir.5NG538800 5.0kb upstream 5.0kb upstream 5000 false Chr05N: 90040316-90045315 Panicum virgatum
Pavir.5NG538800 5.0kb downstream 5.0kb downstream 7611 true Chr05N: 90032705-90040315 Panicum virgatum
Pavir.5NG538800 5.0kb downstream 5.0kb downstream 5000 false Chr05N: 90032705-90037704 Panicum virgatum
Pavir.5NG538800 10.0kb upstream 10.0kb upstream 12611 true Chr05N: 90037705-90050315 Panicum virgatum
Pavir.5NG538800 10.0kb upstream 10.0kb upstream 10000 false Chr05N: 90040316-90050315 Panicum virgatum
Pavir.5NG538800 10.0kb downstream 10.0kb downstream 12611 true Chr05N: 90027705-90040315 Panicum virgatum
Pavir.5NG538800 10.0kb downstream 10.0kb downstream 10000 false Chr05N: 90027705-90037704 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122175160 5267 Panicoideae View MSA
124581439 5269 Grass View MSA
122047314 5273 Angiosperm View MSA
121345007 5274 Embryophyte View MSA
123425553 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain