Gene : Pavir.5NG635400 P. virgatum v4.1
Defline:  (1 of 4) PTHR31956:SF10 - NON-SPECIFIC PHOSPHOLIPASE C2 Genomic Order:  5765
Name:  ? Pavir.5NG635400 Secondary Identifier:  ? PAC:37572252
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvirgatum LIPASYN-PWY Panicum virgatum pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.5NG635400 0.5kb upstream 0.5kb upstream 5045 true Chr05N: 99335844-99340888 Panicum virgatum
Pavir.5NG635400 0.5kb upstream 0.5kb upstream 500 false Chr05N: 99340389-99340888 Panicum virgatum
Pavir.5NG635400 0.5kb downstream 0.5kb downstream 5045 true Chr05N: 99335344-99340388 Panicum virgatum
Pavir.5NG635400 0.5kb downstream 0.5kb downstream 500 false Chr05N: 99335344-99335843 Panicum virgatum
Pavir.5NG635400 1.0kb upstream 1.0kb upstream 5545 true Chr05N: 99335844-99341388 Panicum virgatum
Pavir.5NG635400 1.0kb upstream 1.0kb upstream 1000 false Chr05N: 99340389-99341388 Panicum virgatum
Pavir.5NG635400 1.0kb downstream 1.0kb downstream 5545 true Chr05N: 99334844-99340388 Panicum virgatum
Pavir.5NG635400 1.0kb downstream 1.0kb downstream 1000 false Chr05N: 99334844-99335843 Panicum virgatum
Pavir.5NG635400 2.0kb upstream 2.0kb upstream 6545 true Chr05N: 99335844-99342388 Panicum virgatum
Pavir.5NG635400 2.0kb upstream 2.0kb upstream 2000 false Chr05N: 99340389-99342388 Panicum virgatum
Pavir.5NG635400 2.0kb downstream 2.0kb downstream 6545 true Chr05N: 99333844-99340388 Panicum virgatum
Pavir.5NG635400 2.0kb downstream 2.0kb downstream 2000 false Chr05N: 99333844-99335843 Panicum virgatum
Pavir.5NG635400 5.0kb upstream 5.0kb upstream 9545 true Chr05N: 99335844-99345388 Panicum virgatum
Pavir.5NG635400 5.0kb upstream 5.0kb upstream 5000 false Chr05N: 99340389-99345388 Panicum virgatum
Pavir.5NG635400 5.0kb downstream 5.0kb downstream 9545 true Chr05N: 99330844-99340388 Panicum virgatum
Pavir.5NG635400 5.0kb downstream 5.0kb downstream 5000 false Chr05N: 99330844-99335843 Panicum virgatum
Pavir.5NG635400 10.0kb upstream 10.0kb upstream 14545 true Chr05N: 99335844-99350388 Panicum virgatum
Pavir.5NG635400 10.0kb upstream 10.0kb upstream 10000 false Chr05N: 99340389-99350388 Panicum virgatum
Pavir.5NG635400 10.0kb downstream 10.0kb downstream 14545 true Chr05N: 99325844-99340388 Panicum virgatum
Pavir.5NG635400 10.0kb downstream 10.0kb downstream 10000 false Chr05N: 99325844-99335843 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122188321 5267 Panicoideae View MSA
124568850 5269 Grass View MSA
122048233 5273 Angiosperm View MSA
121345811 5274 Embryophyte View MSA
123380272 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain