Gene : Pavir.5NG632200 P. virgatum v4.1

Defline:  (1 of 2) PTHR10799:SF573 - TRANSCRIPTION TERMINATION FACTOR 2 Genomic Order:  5735
Name:  ? Pavir.5NG632200 Secondary Identifier:  ? PAC:37576897

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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.5NG632200 0.5kb upstream 0.5kb upstream 6692 true Chr05N: 99053729-99060420 Panicum virgatum
Pavir.5NG632200 0.5kb upstream 0.5kb upstream 500 false Chr05N: 99053729-99054228 Panicum virgatum
Pavir.5NG632200 0.5kb downstream 0.5kb downstream 6692 true Chr05N: 99054229-99060920 Panicum virgatum
Pavir.5NG632200 0.5kb downstream 0.5kb downstream 500 false Chr05N: 99060421-99060920 Panicum virgatum
Pavir.5NG632200 1.0kb upstream 1.0kb upstream 7192 true Chr05N: 99053229-99060420 Panicum virgatum
Pavir.5NG632200 1.0kb upstream 1.0kb upstream 1000 false Chr05N: 99053229-99054228 Panicum virgatum
Pavir.5NG632200 1.0kb downstream 1.0kb downstream 7192 true Chr05N: 99054229-99061420 Panicum virgatum
Pavir.5NG632200 1.0kb downstream 1.0kb downstream 1000 false Chr05N: 99060421-99061420 Panicum virgatum
Pavir.5NG632200 2.0kb upstream 2.0kb upstream 8192 true Chr05N: 99052229-99060420 Panicum virgatum
Pavir.5NG632200 2.0kb upstream 2.0kb upstream 2000 false Chr05N: 99052229-99054228 Panicum virgatum
Pavir.5NG632200 2.0kb downstream 2.0kb downstream 8192 true Chr05N: 99054229-99062420 Panicum virgatum
Pavir.5NG632200 2.0kb downstream 2.0kb downstream 2000 false Chr05N: 99060421-99062420 Panicum virgatum
Pavir.5NG632200 5.0kb upstream 5.0kb upstream 11192 true Chr05N: 99049229-99060420 Panicum virgatum
Pavir.5NG632200 5.0kb upstream 5.0kb upstream 5000 false Chr05N: 99049229-99054228 Panicum virgatum
Pavir.5NG632200 5.0kb downstream 5.0kb downstream 11192 true Chr05N: 99054229-99065420 Panicum virgatum
Pavir.5NG632200 5.0kb downstream 5.0kb downstream 5000 false Chr05N: 99060421-99065420 Panicum virgatum
Pavir.5NG632200 10.0kb upstream 10.0kb upstream 16192 true Chr05N: 99044229-99060420 Panicum virgatum
Pavir.5NG632200 10.0kb upstream 10.0kb upstream 10000 false Chr05N: 99044229-99054228 Panicum virgatum
Pavir.5NG632200 10.0kb downstream 10.0kb downstream 16192 true Chr05N: 99054229-99070420 Panicum virgatum
Pavir.5NG632200 10.0kb downstream 10.0kb downstream 10000 false Chr05N: 99060421-99070420 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122191059 5267 Panicoideae View MSA
124571643 5269 Grass View MSA
122041978 5273 Angiosperm View MSA
121346055 5274 Embryophyte View MSA
123424068 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain