Gene : Thecc1EG024016 T. cacao v1.1
Defline:  (1 of 1) PTHR12565//PTHR12565:SF158 - STEROL REGULATORY ELEMENT-BINDING PROTEIN // TRANSCRIPTION FACTOR BHLH106-RELATED Genomic Order:  1271
Name:  ? Thecc1EG024016 Secondary Identifier:  ? PAC:27421873
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG024016 0.5kb upstream 0.5kb upstream 6574 true scaffold_5: 21228469-21235042 Theobroma cacao
Thecc1EG024016 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 21228469-21228968 Theobroma cacao
Thecc1EG024016 0.5kb downstream 0.5kb downstream 6574 true scaffold_5: 21228969-21235542 Theobroma cacao
Thecc1EG024016 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 21235043-21235542 Theobroma cacao
Thecc1EG024016 1.0kb upstream 1.0kb upstream 7074 true scaffold_5: 21227969-21235042 Theobroma cacao
Thecc1EG024016 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 21227969-21228968 Theobroma cacao
Thecc1EG024016 1.0kb downstream 1.0kb downstream 7074 true scaffold_5: 21228969-21236042 Theobroma cacao
Thecc1EG024016 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 21235043-21236042 Theobroma cacao
Thecc1EG024016 2.0kb upstream 2.0kb upstream 8074 true scaffold_5: 21226969-21235042 Theobroma cacao
Thecc1EG024016 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 21226969-21228968 Theobroma cacao
Thecc1EG024016 2.0kb downstream 2.0kb downstream 8074 true scaffold_5: 21228969-21237042 Theobroma cacao
Thecc1EG024016 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 21235043-21237042 Theobroma cacao
Thecc1EG024016 5.0kb upstream 5.0kb upstream 11074 true scaffold_5: 21223969-21235042 Theobroma cacao
Thecc1EG024016 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 21223969-21228968 Theobroma cacao
Thecc1EG024016 5.0kb downstream 5.0kb downstream 11074 true scaffold_5: 21228969-21240042 Theobroma cacao
Thecc1EG024016 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 21235043-21240042 Theobroma cacao
Thecc1EG024016 10.0kb upstream 10.0kb upstream 16074 true scaffold_5: 21218969-21235042 Theobroma cacao
Thecc1EG024016 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 21218969-21228968 Theobroma cacao
Thecc1EG024016 10.0kb downstream 10.0kb downstream 16074 true scaffold_5: 21228969-21245042 Theobroma cacao
Thecc1EG024016 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 21235043-21245042 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123828215 5264 Brassicales-Malvales View MSA
124351340 5266 SBM View MSA
124245665 5268 Malvidae View MSA
124070702 5270 Rosid View MSA
123748515 5271 Pentapetalae View MSA
122793981 5272 Eudicot View MSA
122048947 5273 Angiosperm View MSA
121351451 5274 Embryophyte View MSA
123428440 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain