Gene : Pavir.5NG599400 P. virgatum v4.1
Defline:  (1 of 5) PTHR22600//PTHR22600:SF18 - BETA-HEXOSAMINIDASE // SUBFAMILY NOT NAMED Genomic Order:  5433
Name:  ? Pavir.5NG599400 Secondary Identifier:  ? PAC:37577859
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvirgatum PWY-6902 Panicum virgatum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.5NG599400 0.5kb upstream 0.5kb upstream 6083 true Chr05N: 95316737-95322819 Panicum virgatum
Pavir.5NG599400 0.5kb upstream 0.5kb upstream 500 false Chr05N: 95322320-95322819 Panicum virgatum
Pavir.5NG599400 0.5kb downstream 0.5kb downstream 6083 true Chr05N: 95316237-95322319 Panicum virgatum
Pavir.5NG599400 0.5kb downstream 0.5kb downstream 500 false Chr05N: 95316237-95316736 Panicum virgatum
Pavir.5NG599400 1.0kb upstream 1.0kb upstream 6583 true Chr05N: 95316737-95323319 Panicum virgatum
Pavir.5NG599400 1.0kb upstream 1.0kb upstream 1000 false Chr05N: 95322320-95323319 Panicum virgatum
Pavir.5NG599400 1.0kb downstream 1.0kb downstream 6583 true Chr05N: 95315737-95322319 Panicum virgatum
Pavir.5NG599400 1.0kb downstream 1.0kb downstream 1000 false Chr05N: 95315737-95316736 Panicum virgatum
Pavir.5NG599400 2.0kb upstream 2.0kb upstream 7583 true Chr05N: 95316737-95324319 Panicum virgatum
Pavir.5NG599400 2.0kb upstream 2.0kb upstream 2000 false Chr05N: 95322320-95324319 Panicum virgatum
Pavir.5NG599400 2.0kb downstream 2.0kb downstream 7583 true Chr05N: 95314737-95322319 Panicum virgatum
Pavir.5NG599400 2.0kb downstream 2.0kb downstream 2000 false Chr05N: 95314737-95316736 Panicum virgatum
Pavir.5NG599400 5.0kb upstream 5.0kb upstream 10583 true Chr05N: 95316737-95327319 Panicum virgatum
Pavir.5NG599400 5.0kb upstream 5.0kb upstream 5000 false Chr05N: 95322320-95327319 Panicum virgatum
Pavir.5NG599400 5.0kb downstream 5.0kb downstream 10583 true Chr05N: 95311737-95322319 Panicum virgatum
Pavir.5NG599400 5.0kb downstream 5.0kb downstream 5000 false Chr05N: 95311737-95316736 Panicum virgatum
Pavir.5NG599400 10.0kb upstream 10.0kb upstream 15583 true Chr05N: 95316737-95332319 Panicum virgatum
Pavir.5NG599400 10.0kb upstream 10.0kb upstream 10000 false Chr05N: 95322320-95332319 Panicum virgatum
Pavir.5NG599400 10.0kb downstream 10.0kb downstream 15583 true Chr05N: 95306737-95322319 Panicum virgatum
Pavir.5NG599400 10.0kb downstream 10.0kb downstream 10000 false Chr05N: 95306737-95316736 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122178301 5267 Panicoideae View MSA
124576721 5269 Grass View MSA
122047167 5273 Angiosperm View MSA
121346826 5274 Embryophyte View MSA
123428053 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain