Gene : Pavir.5NG596500 P. virgatum v4.1
Defline:  (1 of 3) 5.3.1.16 - 1-(5-phosphoribosyl)-5- ((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase / Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase Genomic Order:  5408
Name:  ? Pavir.5NG596500 Secondary Identifier:  ? PAC:37577684
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvirgatum HISTSYN-PWY Panicum virgatum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.5NG596500 0.5kb upstream 0.5kb upstream 13310 true Chr05N: 94988594-95001903 Panicum virgatum
Pavir.5NG596500 0.5kb upstream 0.5kb upstream 500 false Chr05N: 94988594-94989093 Panicum virgatum
Pavir.5NG596500 0.5kb downstream 0.5kb downstream 13310 true Chr05N: 94989094-95002403 Panicum virgatum
Pavir.5NG596500 0.5kb downstream 0.5kb downstream 500 false Chr05N: 95001904-95002403 Panicum virgatum
Pavir.5NG596500 1.0kb upstream 1.0kb upstream 13810 true Chr05N: 94988094-95001903 Panicum virgatum
Pavir.5NG596500 1.0kb upstream 1.0kb upstream 1000 false Chr05N: 94988094-94989093 Panicum virgatum
Pavir.5NG596500 1.0kb downstream 1.0kb downstream 13810 true Chr05N: 94989094-95002903 Panicum virgatum
Pavir.5NG596500 1.0kb downstream 1.0kb downstream 1000 false Chr05N: 95001904-95002903 Panicum virgatum
Pavir.5NG596500 2.0kb upstream 2.0kb upstream 14810 true Chr05N: 94987094-95001903 Panicum virgatum
Pavir.5NG596500 2.0kb upstream 2.0kb upstream 2000 false Chr05N: 94987094-94989093 Panicum virgatum
Pavir.5NG596500 2.0kb downstream 2.0kb downstream 14810 true Chr05N: 94989094-95003903 Panicum virgatum
Pavir.5NG596500 2.0kb downstream 2.0kb downstream 2000 false Chr05N: 95001904-95003903 Panicum virgatum
Pavir.5NG596500 5.0kb upstream 5.0kb upstream 17810 true Chr05N: 94984094-95001903 Panicum virgatum
Pavir.5NG596500 5.0kb upstream 5.0kb upstream 5000 false Chr05N: 94984094-94989093 Panicum virgatum
Pavir.5NG596500 5.0kb downstream 5.0kb downstream 17810 true Chr05N: 94989094-95006903 Panicum virgatum
Pavir.5NG596500 5.0kb downstream 5.0kb downstream 5000 false Chr05N: 95001904-95006903 Panicum virgatum
Pavir.5NG596500 10.0kb upstream 10.0kb upstream 22810 true Chr05N: 94979094-95001903 Panicum virgatum
Pavir.5NG596500 10.0kb upstream 10.0kb upstream 10000 false Chr05N: 94979094-94989093 Panicum virgatum
Pavir.5NG596500 10.0kb downstream 10.0kb downstream 22810 true Chr05N: 94989094-95011903 Panicum virgatum
Pavir.5NG596500 10.0kb downstream 10.0kb downstream 10000 false Chr05N: 95001904-95011903 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041281 5273 Angiosperm View MSA
122079871 5267 Panicoideae Singleton cluster - no MSA
124584289 5269 Grass View MSA
121347171 5274 Embryophyte View MSA
123424389 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain