Gene : Pavir.5NG593300 P. virgatum v4.1
Defline:  (1 of 3) 5.3.1.16 - 1-(5-phosphoribosyl)-5- ((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase / Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase Genomic Order:  5380
Name:  ? Pavir.5NG593300 Secondary Identifier:  ? PAC:37572613
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvirgatum HISTSYN-PWY Panicum virgatum pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.5NG593300 0.5kb upstream 0.5kb upstream 5737 true Chr05N: 94665748-94671484 Panicum virgatum
Pavir.5NG593300 0.5kb upstream 0.5kb upstream 500 false Chr05N: 94665748-94666247 Panicum virgatum
Pavir.5NG593300 0.5kb downstream 0.5kb downstream 5737 true Chr05N: 94666248-94671984 Panicum virgatum
Pavir.5NG593300 0.5kb downstream 0.5kb downstream 500 false Chr05N: 94671485-94671984 Panicum virgatum
Pavir.5NG593300 1.0kb upstream 1.0kb upstream 6237 true Chr05N: 94665248-94671484 Panicum virgatum
Pavir.5NG593300 1.0kb upstream 1.0kb upstream 1000 false Chr05N: 94665248-94666247 Panicum virgatum
Pavir.5NG593300 1.0kb downstream 1.0kb downstream 6237 true Chr05N: 94666248-94672484 Panicum virgatum
Pavir.5NG593300 1.0kb downstream 1.0kb downstream 1000 false Chr05N: 94671485-94672484 Panicum virgatum
Pavir.5NG593300 2.0kb upstream 2.0kb upstream 7237 true Chr05N: 94664248-94671484 Panicum virgatum
Pavir.5NG593300 2.0kb upstream 2.0kb upstream 2000 false Chr05N: 94664248-94666247 Panicum virgatum
Pavir.5NG593300 2.0kb downstream 2.0kb downstream 7237 true Chr05N: 94666248-94673484 Panicum virgatum
Pavir.5NG593300 2.0kb downstream 2.0kb downstream 2000 false Chr05N: 94671485-94673484 Panicum virgatum
Pavir.5NG593300 5.0kb upstream 5.0kb upstream 10237 true Chr05N: 94661248-94671484 Panicum virgatum
Pavir.5NG593300 5.0kb upstream 5.0kb upstream 5000 false Chr05N: 94661248-94666247 Panicum virgatum
Pavir.5NG593300 5.0kb downstream 5.0kb downstream 10237 true Chr05N: 94666248-94676484 Panicum virgatum
Pavir.5NG593300 5.0kb downstream 5.0kb downstream 5000 false Chr05N: 94671485-94676484 Panicum virgatum
Pavir.5NG593300 10.0kb upstream 10.0kb upstream 15237 true Chr05N: 94656248-94671484 Panicum virgatum
Pavir.5NG593300 10.0kb upstream 10.0kb upstream 10000 false Chr05N: 94656248-94666247 Panicum virgatum
Pavir.5NG593300 10.0kb downstream 10.0kb downstream 15237 true Chr05N: 94666248-94681484 Panicum virgatum
Pavir.5NG593300 10.0kb downstream 10.0kb downstream 10000 false Chr05N: 94671485-94681484 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041281 5273 Angiosperm View MSA
122194677 5267 Panicoideae View MSA
124584289 5269 Grass View MSA
121347171 5274 Embryophyte View MSA
123424389 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain