Gene : Thecc1EG023927 T. cacao v1.1
Defline:  (1 of 1) K10768 - alkylated DNA repair protein alkB homolog 6 (ALKBH6) Genomic Order:  1252
Name:  ? Thecc1EG023927 Secondary Identifier:  ? PAC:27423346
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-6829 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG023927 0.5kb upstream 0.5kb upstream 5406 true scaffold_5: 20077305-20082710 Theobroma cacao
Thecc1EG023927 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 20077305-20077804 Theobroma cacao
Thecc1EG023927 0.5kb downstream 0.5kb downstream 5406 true scaffold_5: 20077805-20083210 Theobroma cacao
Thecc1EG023927 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 20082711-20083210 Theobroma cacao
Thecc1EG023927 1.0kb upstream 1.0kb upstream 5906 true scaffold_5: 20076805-20082710 Theobroma cacao
Thecc1EG023927 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 20076805-20077804 Theobroma cacao
Thecc1EG023927 1.0kb downstream 1.0kb downstream 5906 true scaffold_5: 20077805-20083710 Theobroma cacao
Thecc1EG023927 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 20082711-20083710 Theobroma cacao
Thecc1EG023927 2.0kb upstream 2.0kb upstream 6906 true scaffold_5: 20075805-20082710 Theobroma cacao
Thecc1EG023927 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 20075805-20077804 Theobroma cacao
Thecc1EG023927 2.0kb downstream 2.0kb downstream 6906 true scaffold_5: 20077805-20084710 Theobroma cacao
Thecc1EG023927 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 20082711-20084710 Theobroma cacao
Thecc1EG023927 5.0kb upstream 5.0kb upstream 9906 true scaffold_5: 20072805-20082710 Theobroma cacao
Thecc1EG023927 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 20072805-20077804 Theobroma cacao
Thecc1EG023927 5.0kb downstream 5.0kb downstream 9906 true scaffold_5: 20077805-20087710 Theobroma cacao
Thecc1EG023927 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 20082711-20087710 Theobroma cacao
Thecc1EG023927 10.0kb upstream 10.0kb upstream 14906 true scaffold_5: 20067805-20082710 Theobroma cacao
Thecc1EG023927 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 20067805-20077804 Theobroma cacao
Thecc1EG023927 10.0kb downstream 10.0kb downstream 14906 true scaffold_5: 20077805-20092710 Theobroma cacao
Thecc1EG023927 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 20082711-20092710 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123835550 5264 Brassicales-Malvales View MSA
124341724 5266 SBM View MSA
124239519 5268 Malvidae View MSA
124065403 5270 Rosid View MSA
123740890 5271 Pentapetalae View MSA
122791933 5272 Eudicot View MSA
122044180 5273 Angiosperm View MSA
121345583 5274 Embryophyte View MSA
123428839 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain