Gene : Thecc1EG023945 T. cacao v1.1
Defline:  (1 of 3) 1.1.1.100 - 3-oxoacyl-[acyl-carrier-protein] reductase Genomic Order:  1253
Name:  ? Thecc1EG023945 Secondary Identifier:  ? PAC:27425533
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

8 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao FASYN-ELONG-PWY Theobroma cacao pathologic  
Tcacao PWY-5156 Theobroma cacao pathologic  
Tcacao PWY-5971 Theobroma cacao pathologic  
Tcacao PWY-5973 Theobroma cacao pathologic  
Tcacao PWY-5989 Theobroma cacao pathologic  
Tcacao PWY-6282 Theobroma cacao pathologic  
Tcacao PWY-7388 Theobroma cacao pathologic  
Tcacao PWY-7663 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG023945 0.5kb upstream 0.5kb upstream 7614 true scaffold_5: 20264741-20272354 Theobroma cacao
Thecc1EG023945 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 20271855-20272354 Theobroma cacao
Thecc1EG023945 0.5kb downstream 0.5kb downstream 7614 true scaffold_5: 20264241-20271854 Theobroma cacao
Thecc1EG023945 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 20264241-20264740 Theobroma cacao
Thecc1EG023945 1.0kb upstream 1.0kb upstream 8114 true scaffold_5: 20264741-20272854 Theobroma cacao
Thecc1EG023945 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 20271855-20272854 Theobroma cacao
Thecc1EG023945 1.0kb downstream 1.0kb downstream 8114 true scaffold_5: 20263741-20271854 Theobroma cacao
Thecc1EG023945 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 20263741-20264740 Theobroma cacao
Thecc1EG023945 2.0kb upstream 2.0kb upstream 9114 true scaffold_5: 20264741-20273854 Theobroma cacao
Thecc1EG023945 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 20271855-20273854 Theobroma cacao
Thecc1EG023945 2.0kb downstream 2.0kb downstream 9114 true scaffold_5: 20262741-20271854 Theobroma cacao
Thecc1EG023945 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 20262741-20264740 Theobroma cacao
Thecc1EG023945 5.0kb upstream 5.0kb upstream 12114 true scaffold_5: 20264741-20276854 Theobroma cacao
Thecc1EG023945 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 20271855-20276854 Theobroma cacao
Thecc1EG023945 5.0kb downstream 5.0kb downstream 12114 true scaffold_5: 20259741-20271854 Theobroma cacao
Thecc1EG023945 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 20259741-20264740 Theobroma cacao
Thecc1EG023945 10.0kb upstream 10.0kb upstream 17114 true scaffold_5: 20264741-20281854 Theobroma cacao
Thecc1EG023945 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 20271855-20281854 Theobroma cacao
Thecc1EG023945 10.0kb downstream 10.0kb downstream 17114 true scaffold_5: 20254741-20271854 Theobroma cacao
Thecc1EG023945 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 20254741-20264740 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123819796 5264 Brassicales-Malvales Singleton cluster - no MSA
124316031 5266 SBM Singleton cluster - no MSA
124164890 5268 Malvidae Singleton cluster - no MSA
124074263 5270 Rosid View MSA
123751674 5271 Pentapetalae View MSA
122788273 5272 Eudicot View MSA
122044153 5273 Angiosperm View MSA
123429133 5275 Viridiplantae View MSA
121344803 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain