Gene : Thecc1EG023913 T. cacao v1.1
Defline:  (1 of 1) 1.1.99.2 - L-2-hydroxyglutarate dehydrogenase / L-alpha-hydroxyglutarate dehydrogenase Genomic Order:  1246
Name:  ? Thecc1EG023913 Secondary Identifier:  ? PAC:27421446
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG023913 0.5kb upstream 0.5kb upstream 9372 true scaffold_5: 19907474-19916845 Theobroma cacao
Thecc1EG023913 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 19907474-19907973 Theobroma cacao
Thecc1EG023913 0.5kb downstream 0.5kb downstream 9372 true scaffold_5: 19907974-19917345 Theobroma cacao
Thecc1EG023913 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 19916846-19917345 Theobroma cacao
Thecc1EG023913 1.0kb upstream 1.0kb upstream 9872 true scaffold_5: 19906974-19916845 Theobroma cacao
Thecc1EG023913 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 19906974-19907973 Theobroma cacao
Thecc1EG023913 1.0kb downstream 1.0kb downstream 9872 true scaffold_5: 19907974-19917845 Theobroma cacao
Thecc1EG023913 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 19916846-19917845 Theobroma cacao
Thecc1EG023913 2.0kb upstream 2.0kb upstream 10872 true scaffold_5: 19905974-19916845 Theobroma cacao
Thecc1EG023913 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 19905974-19907973 Theobroma cacao
Thecc1EG023913 2.0kb downstream 2.0kb downstream 10872 true scaffold_5: 19907974-19918845 Theobroma cacao
Thecc1EG023913 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 19916846-19918845 Theobroma cacao
Thecc1EG023913 5.0kb upstream 5.0kb upstream 13872 true scaffold_5: 19902974-19916845 Theobroma cacao
Thecc1EG023913 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 19902974-19907973 Theobroma cacao
Thecc1EG023913 5.0kb downstream 5.0kb downstream 13872 true scaffold_5: 19907974-19921845 Theobroma cacao
Thecc1EG023913 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 19916846-19921845 Theobroma cacao
Thecc1EG023913 10.0kb upstream 10.0kb upstream 18872 true scaffold_5: 19897974-19916845 Theobroma cacao
Thecc1EG023913 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 19897974-19907973 Theobroma cacao
Thecc1EG023913 10.0kb downstream 10.0kb downstream 18872 true scaffold_5: 19907974-19926845 Theobroma cacao
Thecc1EG023913 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 19916846-19926845 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123827786 5264 Brassicales-Malvales View MSA
124343978 5266 SBM View MSA
124251150 5268 Malvidae View MSA
124061450 5270 Rosid View MSA
123738460 5271 Pentapetalae View MSA
122792382 5272 Eudicot View MSA
122042852 5273 Angiosperm View MSA
121347258 5274 Embryophyte View MSA
123427019 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain