Gene : Pavir.3KG052300 P. virgatum v4.1
Defline:  (1 of 5) PTHR11699//PTHR11699:SF175 - ALDEHYDE DEHYDROGENASE-RELATED // SUBFAMILY NOT NAMED Genomic Order:  492
Name:  ? Pavir.3KG052300 Secondary Identifier:  ? PAC:37589821
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3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvirgatum PWY-2724 Panicum virgatum pathologic  
Pvirgatum PWY66-21 Panicum virgatum pathologic  
Pvirgatum PWY66-389 Panicum virgatum pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.3KG052300 0.5kb upstream 0.5kb upstream 6193 true Chr03K: 4681492-4687684 Panicum virgatum
Pavir.3KG052300 0.5kb upstream 0.5kb upstream 500 false Chr03K: 4681492-4681991 Panicum virgatum
Pavir.3KG052300 0.5kb downstream 0.5kb downstream 6193 true Chr03K: 4681992-4688184 Panicum virgatum
Pavir.3KG052300 0.5kb downstream 0.5kb downstream 500 false Chr03K: 4687685-4688184 Panicum virgatum
Pavir.3KG052300 1.0kb upstream 1.0kb upstream 6693 true Chr03K: 4680992-4687684 Panicum virgatum
Pavir.3KG052300 1.0kb upstream 1.0kb upstream 1000 false Chr03K: 4680992-4681991 Panicum virgatum
Pavir.3KG052300 1.0kb downstream 1.0kb downstream 6693 true Chr03K: 4681992-4688684 Panicum virgatum
Pavir.3KG052300 1.0kb downstream 1.0kb downstream 1000 false Chr03K: 4687685-4688684 Panicum virgatum
Pavir.3KG052300 2.0kb upstream 2.0kb upstream 7693 true Chr03K: 4679992-4687684 Panicum virgatum
Pavir.3KG052300 2.0kb upstream 2.0kb upstream 2000 false Chr03K: 4679992-4681991 Panicum virgatum
Pavir.3KG052300 2.0kb downstream 2.0kb downstream 7693 true Chr03K: 4681992-4689684 Panicum virgatum
Pavir.3KG052300 2.0kb downstream 2.0kb downstream 2000 false Chr03K: 4687685-4689684 Panicum virgatum
Pavir.3KG052300 5.0kb upstream 5.0kb upstream 10693 true Chr03K: 4676992-4687684 Panicum virgatum
Pavir.3KG052300 5.0kb upstream 5.0kb upstream 5000 false Chr03K: 4676992-4681991 Panicum virgatum
Pavir.3KG052300 5.0kb downstream 5.0kb downstream 10693 true Chr03K: 4681992-4692684 Panicum virgatum
Pavir.3KG052300 5.0kb downstream 5.0kb downstream 5000 false Chr03K: 4687685-4692684 Panicum virgatum
Pavir.3KG052300 10.0kb upstream 10.0kb upstream 15693 true Chr03K: 4671992-4687684 Panicum virgatum
Pavir.3KG052300 10.0kb upstream 10.0kb upstream 10000 false Chr03K: 4671992-4681991 Panicum virgatum
Pavir.3KG052300 10.0kb downstream 10.0kb downstream 15693 true Chr03K: 4681992-4697684 Panicum virgatum
Pavir.3KG052300 10.0kb downstream 10.0kb downstream 10000 false Chr03K: 4687685-4697684 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122175771 5267 Panicoideae View MSA
124578019 5269 Grass View MSA
122047593 5273 Angiosperm View MSA
121349887 5274 Embryophyte View MSA
123425420 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain