Gene : Pavir.3KG047700 P. virgatum v4.1
Defline:  (1 of 2) 2.5.1.79 - Thermospermine synthase Genomic Order:  448
Name:  ? Pavir.3KG047700 Secondary Identifier:  ? PAC:37593376
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3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvirgatum BSUBPOLYAMSYN-PWY Panicum virgatum pathologic  
Pvirgatum POLYAMINSYN3-PWY Panicum virgatum pathologic  
Pvirgatum PWY-7528 Panicum virgatum pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.3KG047700 0.5kb upstream 0.5kb upstream 4024 true Chr03K: 4124087-4128110 Panicum virgatum
Pavir.3KG047700 0.5kb upstream 0.5kb upstream 500 false Chr03K: 4124087-4124586 Panicum virgatum
Pavir.3KG047700 0.5kb downstream 0.5kb downstream 4024 true Chr03K: 4124587-4128610 Panicum virgatum
Pavir.3KG047700 0.5kb downstream 0.5kb downstream 500 false Chr03K: 4128111-4128610 Panicum virgatum
Pavir.3KG047700 1.0kb upstream 1.0kb upstream 4524 true Chr03K: 4123587-4128110 Panicum virgatum
Pavir.3KG047700 1.0kb upstream 1.0kb upstream 1000 false Chr03K: 4123587-4124586 Panicum virgatum
Pavir.3KG047700 1.0kb downstream 1.0kb downstream 4524 true Chr03K: 4124587-4129110 Panicum virgatum
Pavir.3KG047700 1.0kb downstream 1.0kb downstream 1000 false Chr03K: 4128111-4129110 Panicum virgatum
Pavir.3KG047700 2.0kb upstream 2.0kb upstream 5524 true Chr03K: 4122587-4128110 Panicum virgatum
Pavir.3KG047700 2.0kb upstream 2.0kb upstream 2000 false Chr03K: 4122587-4124586 Panicum virgatum
Pavir.3KG047700 2.0kb downstream 2.0kb downstream 5524 true Chr03K: 4124587-4130110 Panicum virgatum
Pavir.3KG047700 2.0kb downstream 2.0kb downstream 2000 false Chr03K: 4128111-4130110 Panicum virgatum
Pavir.3KG047700 5.0kb upstream 5.0kb upstream 8524 true Chr03K: 4119587-4128110 Panicum virgatum
Pavir.3KG047700 5.0kb upstream 5.0kb upstream 5000 false Chr03K: 4119587-4124586 Panicum virgatum
Pavir.3KG047700 5.0kb downstream 5.0kb downstream 8524 true Chr03K: 4124587-4133110 Panicum virgatum
Pavir.3KG047700 5.0kb downstream 5.0kb downstream 5000 false Chr03K: 4128111-4133110 Panicum virgatum
Pavir.3KG047700 10.0kb upstream 10.0kb upstream 13524 true Chr03K: 4114587-4128110 Panicum virgatum
Pavir.3KG047700 10.0kb upstream 10.0kb upstream 10000 false Chr03K: 4114587-4124586 Panicum virgatum
Pavir.3KG047700 10.0kb downstream 10.0kb downstream 13524 true Chr03K: 4124587-4138110 Panicum virgatum
Pavir.3KG047700 10.0kb downstream 10.0kb downstream 10000 false Chr03K: 4128111-4138110 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122187008 5267 Panicoideae View MSA
124590287 5269 Grass View MSA
122050339 5273 Angiosperm View MSA
121346949 5274 Embryophyte View MSA
123426712 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain