Gene : Pavir.3KG088500 P. virgatum v4.1
Defline:  (1 of 7) PF00487//PF11960 - Fatty acid desaturase (FA_desaturase) // Domain of unknown function (DUF3474) (DUF3474) Genomic Order:  832
Name:  ? Pavir.3KG088500 Secondary Identifier:  ? PAC:37595695
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.3KG088500 0.5kb upstream 0.5kb upstream 3620 true Chr03K: 7365152-7368771 Panicum virgatum
Pavir.3KG088500 0.5kb upstream 0.5kb upstream 500 false Chr03K: 7365152-7365651 Panicum virgatum
Pavir.3KG088500 0.5kb downstream 0.5kb downstream 3620 true Chr03K: 7365652-7369271 Panicum virgatum
Pavir.3KG088500 0.5kb downstream 0.5kb downstream 500 false Chr03K: 7368772-7369271 Panicum virgatum
Pavir.3KG088500 1.0kb upstream 1.0kb upstream 4120 true Chr03K: 7364652-7368771 Panicum virgatum
Pavir.3KG088500 1.0kb upstream 1.0kb upstream 1000 false Chr03K: 7364652-7365651 Panicum virgatum
Pavir.3KG088500 1.0kb downstream 1.0kb downstream 4120 true Chr03K: 7365652-7369771 Panicum virgatum
Pavir.3KG088500 1.0kb downstream 1.0kb downstream 1000 false Chr03K: 7368772-7369771 Panicum virgatum
Pavir.3KG088500 2.0kb upstream 2.0kb upstream 5120 true Chr03K: 7363652-7368771 Panicum virgatum
Pavir.3KG088500 2.0kb upstream 2.0kb upstream 2000 false Chr03K: 7363652-7365651 Panicum virgatum
Pavir.3KG088500 2.0kb downstream 2.0kb downstream 5120 true Chr03K: 7365652-7370771 Panicum virgatum
Pavir.3KG088500 2.0kb downstream 2.0kb downstream 2000 false Chr03K: 7368772-7370771 Panicum virgatum
Pavir.3KG088500 5.0kb upstream 5.0kb upstream 8120 true Chr03K: 7360652-7368771 Panicum virgatum
Pavir.3KG088500 5.0kb upstream 5.0kb upstream 5000 false Chr03K: 7360652-7365651 Panicum virgatum
Pavir.3KG088500 5.0kb downstream 5.0kb downstream 8120 true Chr03K: 7365652-7373771 Panicum virgatum
Pavir.3KG088500 5.0kb downstream 5.0kb downstream 5000 false Chr03K: 7368772-7373771 Panicum virgatum
Pavir.3KG088500 10.0kb upstream 10.0kb upstream 13120 true Chr03K: 7355652-7368771 Panicum virgatum
Pavir.3KG088500 10.0kb upstream 10.0kb upstream 10000 false Chr03K: 7355652-7365651 Panicum virgatum
Pavir.3KG088500 10.0kb downstream 10.0kb downstream 13120 true Chr03K: 7365652-7378771 Panicum virgatum
Pavir.3KG088500 10.0kb downstream 10.0kb downstream 10000 false Chr03K: 7368772-7378771 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122084383 5267 Panicoideae Singleton cluster - no MSA
124382451 5269 Grass Singleton cluster - no MSA
122051826 5273 Angiosperm View MSA
121351532 5274 Embryophyte View MSA
123426688 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain