Gene : Pavir.6KG369900 P. virgatum v4.1
Defline:  (1 of 2) PTHR22893:SF67 - 12-OXOPHYTODIENOATE REDUCTASE 3 Genomic Order:  3320
Name:  ? Pavir.6KG369900 Secondary Identifier:  ? PAC:37695497
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvirgatum PWY-735 Panicum virgatum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.6KG369900 0.5kb upstream 0.5kb upstream 3795 true Chr06K: 68535183-68538977 Panicum virgatum
Pavir.6KG369900 0.5kb upstream 0.5kb upstream 500 false Chr06K: 68538478-68538977 Panicum virgatum
Pavir.6KG369900 0.5kb downstream 0.5kb downstream 3795 true Chr06K: 68534683-68538477 Panicum virgatum
Pavir.6KG369900 0.5kb downstream 0.5kb downstream 500 false Chr06K: 68534683-68535182 Panicum virgatum
Pavir.6KG369900 1.0kb upstream 1.0kb upstream 4295 true Chr06K: 68535183-68539477 Panicum virgatum
Pavir.6KG369900 1.0kb upstream 1.0kb upstream 1000 false Chr06K: 68538478-68539477 Panicum virgatum
Pavir.6KG369900 1.0kb downstream 1.0kb downstream 4295 true Chr06K: 68534183-68538477 Panicum virgatum
Pavir.6KG369900 1.0kb downstream 1.0kb downstream 1000 false Chr06K: 68534183-68535182 Panicum virgatum
Pavir.6KG369900 2.0kb upstream 2.0kb upstream 5295 true Chr06K: 68535183-68540477 Panicum virgatum
Pavir.6KG369900 2.0kb upstream 2.0kb upstream 2000 false Chr06K: 68538478-68540477 Panicum virgatum
Pavir.6KG369900 2.0kb downstream 2.0kb downstream 5295 true Chr06K: 68533183-68538477 Panicum virgatum
Pavir.6KG369900 2.0kb downstream 2.0kb downstream 2000 false Chr06K: 68533183-68535182 Panicum virgatum
Pavir.6KG369900 5.0kb upstream 5.0kb upstream 8295 true Chr06K: 68535183-68543477 Panicum virgatum
Pavir.6KG369900 5.0kb upstream 5.0kb upstream 5000 false Chr06K: 68538478-68543477 Panicum virgatum
Pavir.6KG369900 5.0kb downstream 5.0kb downstream 8295 true Chr06K: 68530183-68538477 Panicum virgatum
Pavir.6KG369900 5.0kb downstream 5.0kb downstream 5000 false Chr06K: 68530183-68535182 Panicum virgatum
Pavir.6KG369900 10.0kb upstream 10.0kb upstream 13295 true Chr06K: 68535183-68548477 Panicum virgatum
Pavir.6KG369900 10.0kb upstream 10.0kb upstream 10000 false Chr06K: 68538478-68548477 Panicum virgatum
Pavir.6KG369900 10.0kb downstream 10.0kb downstream 13295 true Chr06K: 68525183-68538477 Panicum virgatum
Pavir.6KG369900 10.0kb downstream 10.0kb downstream 10000 false Chr06K: 68525183-68535182 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122192557 5267 Panicoideae View MSA
124576769 5269 Grass View MSA
122045758 5273 Angiosperm View MSA
121351640 5274 Embryophyte View MSA
123428487 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain