Gene : Thecc1EG024494 T. cacao v1.1
Defline:  (1 of 3) PTHR10774:SF61 - ELONGATION DEFECTIVE 1 Genomic Order:  1466
Name:  ? Thecc1EG024494 Secondary Identifier:  ? PAC:27424443
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG024494 0.5kb upstream 0.5kb upstream 7901 true scaffold_5: 26106572-26114472 Theobroma cacao
Thecc1EG024494 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 26106572-26107071 Theobroma cacao
Thecc1EG024494 0.5kb downstream 0.5kb downstream 7901 true scaffold_5: 26107072-26114972 Theobroma cacao
Thecc1EG024494 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 26114473-26114972 Theobroma cacao
Thecc1EG024494 1.0kb upstream 1.0kb upstream 8401 true scaffold_5: 26106072-26114472 Theobroma cacao
Thecc1EG024494 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 26106072-26107071 Theobroma cacao
Thecc1EG024494 1.0kb downstream 1.0kb downstream 8401 true scaffold_5: 26107072-26115472 Theobroma cacao
Thecc1EG024494 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 26114473-26115472 Theobroma cacao
Thecc1EG024494 2.0kb upstream 2.0kb upstream 9401 true scaffold_5: 26105072-26114472 Theobroma cacao
Thecc1EG024494 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 26105072-26107071 Theobroma cacao
Thecc1EG024494 2.0kb downstream 2.0kb downstream 9401 true scaffold_5: 26107072-26116472 Theobroma cacao
Thecc1EG024494 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 26114473-26116472 Theobroma cacao
Thecc1EG024494 5.0kb upstream 5.0kb upstream 12401 true scaffold_5: 26102072-26114472 Theobroma cacao
Thecc1EG024494 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 26102072-26107071 Theobroma cacao
Thecc1EG024494 5.0kb downstream 5.0kb downstream 12401 true scaffold_5: 26107072-26119472 Theobroma cacao
Thecc1EG024494 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 26114473-26119472 Theobroma cacao
Thecc1EG024494 10.0kb upstream 10.0kb upstream 17401 true scaffold_5: 26097072-26114472 Theobroma cacao
Thecc1EG024494 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 26097072-26107071 Theobroma cacao
Thecc1EG024494 10.0kb downstream 10.0kb downstream 17401 true scaffold_5: 26107072-26124472 Theobroma cacao
Thecc1EG024494 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 26114473-26124472 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123831165 5264 Brassicales-Malvales View MSA
124347428 5266 SBM View MSA
124242251 5268 Malvidae View MSA
124074098 5270 Rosid View MSA
123747804 5271 Pentapetalae View MSA
122791335 5272 Eudicot View MSA
122042334 5273 Angiosperm View MSA
121345597 5274 Embryophyte View MSA
123428781 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain