Gene : Thecc1EG024404 T. cacao v1.1
Defline:  (1 of 1) 1.5.1.2 - Pyrroline-5-carboxylate reductase / P5CR Genomic Order:  1428
Name:  ? Thecc1EG024404 Secondary Identifier:  ? PAC:27422730
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao ARG-PRO-PWY Theobroma cacao pathologic  
Tcacao PROSYN-PWY Theobroma cacao pathologic  
Tcacao PWY-3341 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG024404 0.5kb upstream 0.5kb upstream 7527 true scaffold_5: 25208635-25216161 Theobroma cacao
Thecc1EG024404 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 25208635-25209134 Theobroma cacao
Thecc1EG024404 0.5kb downstream 0.5kb downstream 7527 true scaffold_5: 25209135-25216661 Theobroma cacao
Thecc1EG024404 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 25216162-25216661 Theobroma cacao
Thecc1EG024404 1.0kb upstream 1.0kb upstream 8027 true scaffold_5: 25208135-25216161 Theobroma cacao
Thecc1EG024404 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 25208135-25209134 Theobroma cacao
Thecc1EG024404 1.0kb downstream 1.0kb downstream 8027 true scaffold_5: 25209135-25217161 Theobroma cacao
Thecc1EG024404 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 25216162-25217161 Theobroma cacao
Thecc1EG024404 2.0kb upstream 2.0kb upstream 9027 true scaffold_5: 25207135-25216161 Theobroma cacao
Thecc1EG024404 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 25207135-25209134 Theobroma cacao
Thecc1EG024404 2.0kb downstream 2.0kb downstream 9027 true scaffold_5: 25209135-25218161 Theobroma cacao
Thecc1EG024404 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 25216162-25218161 Theobroma cacao
Thecc1EG024404 5.0kb upstream 5.0kb upstream 12027 true scaffold_5: 25204135-25216161 Theobroma cacao
Thecc1EG024404 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 25204135-25209134 Theobroma cacao
Thecc1EG024404 5.0kb downstream 5.0kb downstream 12027 true scaffold_5: 25209135-25221161 Theobroma cacao
Thecc1EG024404 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 25216162-25221161 Theobroma cacao
Thecc1EG024404 10.0kb upstream 10.0kb upstream 17027 true scaffold_5: 25199135-25216161 Theobroma cacao
Thecc1EG024404 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 25199135-25209134 Theobroma cacao
Thecc1EG024404 10.0kb downstream 10.0kb downstream 17027 true scaffold_5: 25209135-25226161 Theobroma cacao
Thecc1EG024404 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 25216162-25226161 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123837658 5264 Brassicales-Malvales View MSA
124337864 5266 SBM View MSA
124250684 5268 Malvidae View MSA
124061027 5270 Rosid View MSA
123740492 5271 Pentapetalae View MSA
122788937 5272 Eudicot View MSA
122043656 5273 Angiosperm View MSA
123428906 5275 Viridiplantae View MSA
121346927 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain