Gene : Thecc1EG024387 T. cacao v1.1
Defline:  (1 of 1) PTHR10535//PTHR10535:SF2 - DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC1 // DNA-DIRECTED RNA POLYMERASE V SUBUNIT 5A-RELATED Genomic Order:  1422
Name:  ? Thecc1EG024387 Secondary Identifier:  ? PAC:27422915
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG024387 0.5kb upstream 0.5kb upstream 4386 true scaffold_5: 25099651-25104036 Theobroma cacao
Thecc1EG024387 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 25103537-25104036 Theobroma cacao
Thecc1EG024387 0.5kb downstream 0.5kb downstream 4386 true scaffold_5: 25099151-25103536 Theobroma cacao
Thecc1EG024387 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 25099151-25099650 Theobroma cacao
Thecc1EG024387 1.0kb upstream 1.0kb upstream 4886 true scaffold_5: 25099651-25104536 Theobroma cacao
Thecc1EG024387 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 25103537-25104536 Theobroma cacao
Thecc1EG024387 1.0kb downstream 1.0kb downstream 4886 true scaffold_5: 25098651-25103536 Theobroma cacao
Thecc1EG024387 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 25098651-25099650 Theobroma cacao
Thecc1EG024387 2.0kb upstream 2.0kb upstream 5886 true scaffold_5: 25099651-25105536 Theobroma cacao
Thecc1EG024387 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 25103537-25105536 Theobroma cacao
Thecc1EG024387 2.0kb downstream 2.0kb downstream 5886 true scaffold_5: 25097651-25103536 Theobroma cacao
Thecc1EG024387 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 25097651-25099650 Theobroma cacao
Thecc1EG024387 5.0kb upstream 5.0kb upstream 8886 true scaffold_5: 25099651-25108536 Theobroma cacao
Thecc1EG024387 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 25103537-25108536 Theobroma cacao
Thecc1EG024387 5.0kb downstream 5.0kb downstream 8886 true scaffold_5: 25094651-25103536 Theobroma cacao
Thecc1EG024387 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 25094651-25099650 Theobroma cacao
Thecc1EG024387 10.0kb upstream 10.0kb upstream 13886 true scaffold_5: 25099651-25113536 Theobroma cacao
Thecc1EG024387 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 25103537-25113536 Theobroma cacao
Thecc1EG024387 10.0kb downstream 10.0kb downstream 13886 true scaffold_5: 25089651-25103536 Theobroma cacao
Thecc1EG024387 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 25089651-25099650 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123828631 5264 Brassicales-Malvales View MSA
124349790 5266 SBM View MSA
124240672 5268 Malvidae View MSA
124067082 5270 Rosid View MSA
123741650 5271 Pentapetalae View MSA
122792617 5272 Eudicot View MSA
122051300 5273 Angiosperm View MSA
121352511 5274 Embryophyte View MSA
123382830 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain