Gene : Pavir.3KG200100 P. virgatum v4.1
Defline:  (1 of 4) K12198 - charged multivesicular body protein 5 (CHMP5, VPS60) Genomic Order:  1858
Name:  ? Pavir.3KG200100 Secondary Identifier:  ? PAC:37590580
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.3KG200100 0.5kb upstream 0.5kb upstream 3335 true Chr03K: 17798124-17801458 Panicum virgatum
Pavir.3KG200100 0.5kb upstream 0.5kb upstream 500 false Chr03K: 17800959-17801458 Panicum virgatum
Pavir.3KG200100 0.5kb downstream 0.5kb downstream 3335 true Chr03K: 17797624-17800958 Panicum virgatum
Pavir.3KG200100 0.5kb downstream 0.5kb downstream 500 false Chr03K: 17797624-17798123 Panicum virgatum
Pavir.3KG200100 1.0kb upstream 1.0kb upstream 3835 true Chr03K: 17798124-17801958 Panicum virgatum
Pavir.3KG200100 1.0kb upstream 1.0kb upstream 1000 false Chr03K: 17800959-17801958 Panicum virgatum
Pavir.3KG200100 1.0kb downstream 1.0kb downstream 3835 true Chr03K: 17797124-17800958 Panicum virgatum
Pavir.3KG200100 1.0kb downstream 1.0kb downstream 1000 false Chr03K: 17797124-17798123 Panicum virgatum
Pavir.3KG200100 2.0kb upstream 2.0kb upstream 4835 true Chr03K: 17798124-17802958 Panicum virgatum
Pavir.3KG200100 2.0kb upstream 2.0kb upstream 2000 false Chr03K: 17800959-17802958 Panicum virgatum
Pavir.3KG200100 2.0kb downstream 2.0kb downstream 4835 true Chr03K: 17796124-17800958 Panicum virgatum
Pavir.3KG200100 2.0kb downstream 2.0kb downstream 2000 false Chr03K: 17796124-17798123 Panicum virgatum
Pavir.3KG200100 5.0kb upstream 5.0kb upstream 7835 true Chr03K: 17798124-17805958 Panicum virgatum
Pavir.3KG200100 5.0kb upstream 5.0kb upstream 5000 false Chr03K: 17800959-17805958 Panicum virgatum
Pavir.3KG200100 5.0kb downstream 5.0kb downstream 7835 true Chr03K: 17793124-17800958 Panicum virgatum
Pavir.3KG200100 5.0kb downstream 5.0kb downstream 5000 false Chr03K: 17793124-17798123 Panicum virgatum
Pavir.3KG200100 10.0kb upstream 10.0kb upstream 12835 true Chr03K: 17798124-17810958 Panicum virgatum
Pavir.3KG200100 10.0kb upstream 10.0kb upstream 10000 false Chr03K: 17800959-17810958 Panicum virgatum
Pavir.3KG200100 10.0kb downstream 10.0kb downstream 12835 true Chr03K: 17788124-17800958 Panicum virgatum
Pavir.3KG200100 10.0kb downstream 10.0kb downstream 10000 false Chr03K: 17788124-17798123 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122177140 5267 Panicoideae View MSA
124582350 5269 Grass View MSA
122046094 5273 Angiosperm View MSA
121350870 5274 Embryophyte View MSA
123426524 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain