Gene : Thecc1EG024315 T. cacao v1.1
Defline:  (1 of 2) PTHR13935:SF41 - ACHAETE-SCUTE HOMOLOG 3 Genomic Order:  1378
Name:  ? Thecc1EG024315 Secondary Identifier:  ? PAC:27421419
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG024315 0.5kb upstream 0.5kb upstream 2602 true scaffold_5: 24484250-24486851 Theobroma cacao
Thecc1EG024315 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 24486352-24486851 Theobroma cacao
Thecc1EG024315 0.5kb downstream 0.5kb downstream 2602 true scaffold_5: 24483750-24486351 Theobroma cacao
Thecc1EG024315 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 24483750-24484249 Theobroma cacao
Thecc1EG024315 1.0kb upstream 1.0kb upstream 3102 true scaffold_5: 24484250-24487351 Theobroma cacao
Thecc1EG024315 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 24486352-24487351 Theobroma cacao
Thecc1EG024315 1.0kb downstream 1.0kb downstream 3102 true scaffold_5: 24483250-24486351 Theobroma cacao
Thecc1EG024315 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 24483250-24484249 Theobroma cacao
Thecc1EG024315 2.0kb upstream 2.0kb upstream 4102 true scaffold_5: 24484250-24488351 Theobroma cacao
Thecc1EG024315 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 24486352-24488351 Theobroma cacao
Thecc1EG024315 2.0kb downstream 2.0kb downstream 4102 true scaffold_5: 24482250-24486351 Theobroma cacao
Thecc1EG024315 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 24482250-24484249 Theobroma cacao
Thecc1EG024315 5.0kb upstream 5.0kb upstream 7102 true scaffold_5: 24484250-24491351 Theobroma cacao
Thecc1EG024315 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 24486352-24491351 Theobroma cacao
Thecc1EG024315 5.0kb downstream 5.0kb downstream 7102 true scaffold_5: 24479250-24486351 Theobroma cacao
Thecc1EG024315 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 24479250-24484249 Theobroma cacao
Thecc1EG024315 10.0kb upstream 10.0kb upstream 12102 true scaffold_5: 24484250-24496351 Theobroma cacao
Thecc1EG024315 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 24486352-24496351 Theobroma cacao
Thecc1EG024315 10.0kb downstream 10.0kb downstream 12102 true scaffold_5: 24474250-24486351 Theobroma cacao
Thecc1EG024315 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 24474250-24484249 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123836801 5264 Brassicales-Malvales View MSA
124322205 5266 SBM View MSA
124254233 5268 Malvidae View MSA
124071325 5270 Rosid View MSA
123751421 5271 Pentapetalae View MSA
122790904 5272 Eudicot View MSA
122049440 5273 Angiosperm View MSA
121311403 5274 Embryophyte View MSA
123348704 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain