Gene : Pavir.3KG175900 P. virgatum v4.1
Defline:  (1 of 2) PTHR21262:SF12 - CA2+-ACTIVATED RELA/SPOT-LIKE PROTEIN Genomic Order:  1632
Name:  ? Pavir.3KG175900 Secondary Identifier:  ? PAC:37594993
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Expression

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20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.3KG175900 0.5kb upstream 0.5kb upstream 4974 true Chr03K: 15836432-15841405 Panicum virgatum
Pavir.3KG175900 0.5kb upstream 0.5kb upstream 500 false Chr03K: 15836432-15836931 Panicum virgatum
Pavir.3KG175900 0.5kb downstream 0.5kb downstream 4974 true Chr03K: 15836932-15841905 Panicum virgatum
Pavir.3KG175900 0.5kb downstream 0.5kb downstream 500 false Chr03K: 15841406-15841905 Panicum virgatum
Pavir.3KG175900 1.0kb upstream 1.0kb upstream 5474 true Chr03K: 15835932-15841405 Panicum virgatum
Pavir.3KG175900 1.0kb upstream 1.0kb upstream 1000 false Chr03K: 15835932-15836931 Panicum virgatum
Pavir.3KG175900 1.0kb downstream 1.0kb downstream 5474 true Chr03K: 15836932-15842405 Panicum virgatum
Pavir.3KG175900 1.0kb downstream 1.0kb downstream 1000 false Chr03K: 15841406-15842405 Panicum virgatum
Pavir.3KG175900 2.0kb upstream 2.0kb upstream 6474 true Chr03K: 15834932-15841405 Panicum virgatum
Pavir.3KG175900 2.0kb upstream 2.0kb upstream 2000 false Chr03K: 15834932-15836931 Panicum virgatum
Pavir.3KG175900 2.0kb downstream 2.0kb downstream 6474 true Chr03K: 15836932-15843405 Panicum virgatum
Pavir.3KG175900 2.0kb downstream 2.0kb downstream 2000 false Chr03K: 15841406-15843405 Panicum virgatum
Pavir.3KG175900 5.0kb upstream 5.0kb upstream 9474 true Chr03K: 15831932-15841405 Panicum virgatum
Pavir.3KG175900 5.0kb upstream 5.0kb upstream 5000 false Chr03K: 15831932-15836931 Panicum virgatum
Pavir.3KG175900 5.0kb downstream 5.0kb downstream 9474 true Chr03K: 15836932-15846405 Panicum virgatum
Pavir.3KG175900 5.0kb downstream 5.0kb downstream 5000 false Chr03K: 15841406-15846405 Panicum virgatum
Pavir.3KG175900 10.0kb upstream 10.0kb upstream 14474 true Chr03K: 15826932-15841405 Panicum virgatum
Pavir.3KG175900 10.0kb upstream 10.0kb upstream 10000 false Chr03K: 15826932-15836931 Panicum virgatum
Pavir.3KG175900 10.0kb downstream 10.0kb downstream 14474 true Chr03K: 15836932-15851405 Panicum virgatum
Pavir.3KG175900 10.0kb downstream 10.0kb downstream 10000 false Chr03K: 15841406-15851405 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122178126 5267 Panicoideae View MSA
124571967 5269 Grass View MSA
122044373 5273 Angiosperm View MSA
121310285 5274 Embryophyte View MSA
123347812 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain