Gene : Thecc1EG024267 T. cacao v1.1
Defline:  (1 of 1) 1.4.7.1 - Glutamate synthase (ferredoxin) / Ferredoxin-dependent glutamate synthase Genomic Order:  1367
Name:  ? Thecc1EG024267 Secondary Identifier:  ? PAC:27421337
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao CITRULBIO-PWY Theobroma cacao pathologic  
Tcacao GLUTAMINDEG-PWY Theobroma cacao pathologic  
Tcacao PWY-3282 Theobroma cacao pathologic  
Tcacao PWY-4341 Theobroma cacao pathologic  
Tcacao PWY-6549 Theobroma cacao pathologic  
Tcacao PWY-6964 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG024267 0.5kb upstream 0.5kb upstream 49735 true scaffold_5: 24031839-24081573 Theobroma cacao
Thecc1EG024267 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 24031839-24032338 Theobroma cacao
Thecc1EG024267 0.5kb downstream 0.5kb downstream 49735 true scaffold_5: 24032339-24082073 Theobroma cacao
Thecc1EG024267 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 24081574-24082073 Theobroma cacao
Thecc1EG024267 1.0kb upstream 1.0kb upstream 50235 true scaffold_5: 24031339-24081573 Theobroma cacao
Thecc1EG024267 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 24031339-24032338 Theobroma cacao
Thecc1EG024267 1.0kb downstream 1.0kb downstream 50235 true scaffold_5: 24032339-24082573 Theobroma cacao
Thecc1EG024267 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 24081574-24082573 Theobroma cacao
Thecc1EG024267 2.0kb upstream 2.0kb upstream 51235 true scaffold_5: 24030339-24081573 Theobroma cacao
Thecc1EG024267 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 24030339-24032338 Theobroma cacao
Thecc1EG024267 2.0kb downstream 2.0kb downstream 51235 true scaffold_5: 24032339-24083573 Theobroma cacao
Thecc1EG024267 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 24081574-24083573 Theobroma cacao
Thecc1EG024267 5.0kb upstream 5.0kb upstream 54235 true scaffold_5: 24027339-24081573 Theobroma cacao
Thecc1EG024267 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 24027339-24032338 Theobroma cacao
Thecc1EG024267 5.0kb downstream 5.0kb downstream 54235 true scaffold_5: 24032339-24086573 Theobroma cacao
Thecc1EG024267 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 24081574-24086573 Theobroma cacao
Thecc1EG024267 10.0kb upstream 10.0kb upstream 59235 true scaffold_5: 24022339-24081573 Theobroma cacao
Thecc1EG024267 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 24022339-24032338 Theobroma cacao
Thecc1EG024267 10.0kb downstream 10.0kb downstream 59235 true scaffold_5: 24032339-24091573 Theobroma cacao
Thecc1EG024267 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 24081574-24091573 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041031 5273 Angiosperm View MSA
123831579 5264 Brassicales-Malvales View MSA
124341671 5266 SBM View MSA
124239263 5268 Malvidae View MSA
124064283 5270 Rosid View MSA
123736436 5271 Pentapetalae View MSA
122793515 5272 Eudicot View MSA
121351458 5274 Embryophyte View MSA
123425051 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain